Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VPS13CQ709C8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VPS13CQ709C8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 VDAC1P3-201ENST00000434069 851 ntBASIC2.08□□□□□ -2.08
VPS13CQ709C8 RPS12P2-201ENST00000439728 269 ntBASIC2.08□□□□□ -2.08
VPS13CQ709C8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 AC108860.1-201ENST00000484521 383 ntBASIC2.08□□□□□ -2.08
VPS13CQ709C8 SRIP1-201ENST00000489235 288 ntBASIC2.08□□□□□ -2.08
VPS13CQ709C8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 AC007423.1-201ENST00000605009 627 ntBASIC2.08□□□□□ -2.08
VPS13CQ709C8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 NEAT1-202ENST00000501122 22743 ntBASIC2.08□□□□□ -2.08
VPS13CQ709C8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VPS13CQ709C8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 MIR4781-201ENST00000585250 76 ntBASIC2.08□□□□□ -2.08
VPS13CQ709C8 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VPS13CQ709C8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VPS13CQ709C8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
VPS13CQ709C8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 SNORD114-1-201ENST00000362705 72 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC112220.1-201ENST00000434628 355 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 AP000936.3-201ENST00000438127 255 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 RPL23AP11-201ENST00000475260 469 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 RN7SKP24-201ENST00000515888 284 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC093673.2-201ENST00000609674 331 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VPS13CQ709C8 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC087565.3-202ENST00000642085 1603 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VPS13CQ709C8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS13CQ709C8 RPL31P45-201ENST00000419532 356 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC004801.2-202ENST00000463559 283 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC104454.1-201ENST00000421341 1401 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 RNU2-2P-201ENST00000410396 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 TRBV1-201ENST00000476502 284 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC010198.2-201ENST00000550612 259 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.15-201ENST00000611544 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.16-201ENST00000613119 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 MIR6845-201ENST00000613182 61 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.12-201ENST00000613778 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.20-201ENST00000613956 192 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.9-201ENST00000615427 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.11-201ENST00000616345 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.2-201ENST00000616535 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.3-201ENST00000617785 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.19-201ENST00000618602 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 RNU2-1-201ENST00000618664 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.6-201ENST00000619225 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.5-201ENST00000619465 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 U2.10-201ENST00000620268 191 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 AC090897.3-201ENST00000636973 1157 ntBASIC2.07□□□□□ -2.08
VPS13CQ709C8 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.07□□□□□ -2.08
VPS13CQ709C8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS13CQ709C8 RNU6-618P-201ENST00000363518 112 ntBASIC2.06□□□□□ -2.08
VPS13CQ709C8 AL121882.1-201ENST00000422893 417 ntBASIC2.06□□□□□ -2.08
VPS13CQ709C8 OR6K1P-201ENST00000456766 971 ntBASIC2.06□□□□□ -2.08
VPS13CQ709C8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS13CQ709C8 MIR6873-201ENST00000622788 63 ntBASIC2.06□□□□□ -2.08
VPS13CQ709C8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13CQ709C8 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS13CQ709C8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13CQ709C8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13CQ709C8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13CQ709C8 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13CQ709C8 RN7SKP44-201ENST00000363602 316 ntBASIC2.06□□□□□ -2.08
VPS13CQ709C8 U8.13-201ENST00000390842 128 ntBASIC2.06□□□□□ -2.08
VPS13CQ709C8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS13CQ709C8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS13CQ709C8 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS13CQ709C8 AC022882.1-201ENST00000532142 501 ntBASIC2.06□□□□□ -2.08
VPS13CQ709C8 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS13CQ709C8 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VPS13CQ709C8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS13CQ709C8 AC108471.1-201ENST00000513977 287 ntBASIC2.06□□□□□ -2.08
VPS13CQ709C8 AP005136.1-201ENST00000579765 429 ntBASIC2.06□□□□□ -2.08
VPS13CQ709C8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS13CQ709C8 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS13CQ709C8 TTC39DP-201ENST00000416781 1688 ntBASIC2.06□□□□□ -2.08
VPS13CQ709C8 SPATA2P1-201ENST00000431223 2055 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms