Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 Y_RNA.122-201ENST00000363331 96 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 Z82205.1-201ENST00000428456 297 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 BTG3P1-201ENST00000435859 716 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 AC096638.1-201ENST00000444678 216 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 AC011753.1-201ENST00000451001 220 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 RPL30P9-201ENST00000465586 330 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 AC234781.5-201ENST00000508429 271 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 RN7SKP24-201ENST00000515888 284 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 RNA5SP320-201ENST00000516263 124 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 OR5BN1P-201ENST00000532955 829 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 GNAI2P1-201ENST00000541815 315 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 SUB1P3-201ENST00000564581 315 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 MIR4738-201ENST00000579134 87 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 AC007423.1-201ENST00000605009 627 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 MIR448-201ENST00000362131 111 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 EI24P2-201ENST00000397776 1076 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 RANP7-201ENST00000418085 644 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 HMGB3P11-201ENST00000440127 604 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 HMGB1P19-201ENST00000517578 577 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 CYP2C60P-201ENST00000566088 139 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 Z82195.1-201ENST00000604558 398 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 TAB3P1-202ENST00000452645 1634 ntBASIC2.52□□□□□ -2.01
RIF1Q5UIP0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
RIF1Q5UIP0 RNU1-35P-201ENST00000362782 153 ntBASIC2.51□□□□□ -2.01
RIF1Q5UIP0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RIF1Q5UIP0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.51□□□□□ -2.01
RIF1Q5UIP0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.51□□□□□ -2.01
RIF1Q5UIP0 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.51□□□□□ -2.01
RIF1Q5UIP0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.51□□□□□ -2.01
RIF1Q5UIP0 MIR3605-201ENST00000583214 100 ntBASIC2.51□□□□□ -2.01
RIF1Q5UIP0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.51□□□□□ -2.01
RIF1Q5UIP0 BTF3P7-201ENST00000407097 488 ntBASIC2.51□□□□□ -2.01
RIF1Q5UIP0 RN7SKP32-201ENST00000410167 303 ntBASIC2.51□□□□□ -2.01
RIF1Q5UIP0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.51□□□□□ -2.01
RIF1Q5UIP0 AC006539.3-201ENST00000454258 129 ntBASIC2.51□□□□□ -2.01
RIF1Q5UIP0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.51□□□□□ -2.01
RIF1Q5UIP0 OR4U1P-201ENST00000554958 912 ntBASIC2.51□□□□□ -2.01
RIF1Q5UIP0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.51□□□□□ -2.01
RIF1Q5UIP0 AC011494.1-201ENST00000596454 237 ntBASIC2.51□□□□□ -2.01
RIF1Q5UIP0 AC103858.2-201ENST00000621471 543 ntBASIC2.51□□□□□ -2.01
RIF1Q5UIP0 AL359715.4-201ENST00000606629 1436 ntBASIC2.51□□□□□ -2.01
RIF1Q5UIP0 RNU1-17P-201ENST00000363022 152 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC004987.3-201ENST00000413879 771 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 SNRPGP9-201ENST00000456025 225 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 HMGN1P18-201ENST00000457642 277 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC009237.17-201ENST00000618111 748 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC110994.2-201ENST00000635481 492 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC005261.6-201ENST00000623072 1387 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC011460.1-201ENST00000636268 1834 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 RN7SKP58-201ENST00000411010 305 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AL160275.2-201ENST00000412010 394 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 RPL5P30-201ENST00000465511 891 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC118282.1-201ENST00000506408 765 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 TRAV11-201ENST00000539512 339 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC018630.1-201ENST00000541376 925 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC128687.1-201ENST00000605304 619 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC090897.3-201ENST00000636973 1157 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AC027514.1-201ENST00000588561 1603 ntBASIC2.5□□□□□ -2.01
RIF1Q5UIP0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
RIF1Q5UIP0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RIF1Q5UIP0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RIF1Q5UIP0 CYCSP49-201ENST00000420810 319 ntBASIC2.49□□□□□ -2.01
RIF1Q5UIP0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.49□□□□□ -2.01
RIF1Q5UIP0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.49□□□□□ -2.01
RIF1Q5UIP0 AC093663.2-201ENST00000484625 313 ntBASIC2.49□□□□□ -2.01
RIF1Q5UIP0 AC026464.5-201ENST00000562497 722 ntBASIC2.49□□□□□ -2.01
RIF1Q5UIP0 AC020895.1-201ENST00000595362 272 ntBASIC2.49□□□□□ -2.01
RIF1Q5UIP0 AC023813.4-201ENST00000607580 580 ntBASIC2.49□□□□□ -2.01
RIF1Q5UIP0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RIF1Q5UIP0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms