Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AL356276.2-201ENST00000435919 558 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AL591503.2-201ENST00000442314 1005 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 OR6K5P-201ENST00000447050 945 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AL133217.1-201ENST00000450980 425 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 RNU7-125P-201ENST00000458760 62 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC010469.1-201ENST00000463864 576 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 RPL23AP2-201ENST00000471227 466 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AP000893.1-201ENST00000474462 794 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 ACTG1P13-201ENST00000486987 1043 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 RPS3AP22-201ENST00000488297 769 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC026412.2-201ENST00000512270 1075 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 HIGD1AP3-201ENST00000515857 278 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 LARP7P2-201ENST00000575306 125 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AL009028.1-201ENST00000604895 802 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AL591034.3-201ENST00000605511 685 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 U73479.1-201ENST00000618062 168 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AP005019.3-201ENST00000620418 560 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC078883.4-201ENST00000623218 367 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC139769.1-204ENST00000472297 1931 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 NXPH1-205ENST00000602349 1953 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 SGO1P2-201ENST00000429458 1589 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 GABPAP-201ENST00000419271 1356 ntBASIC3.63□□□□□ -1.83
PDLIM3Q53GG5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 ZNF137P-201ENST00000456718 1920 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 SNRPEP3-201ENST00000338402 276 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 RNU1-15P-201ENST00000353977 144 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 SNORA4.1-201ENST00000364263 144 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 MIR7-3-201ENST00000384898 110 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 RSL24D1P4-201ENST00000400938 484 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AL590084.2-201ENST00000401481 382 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 MIR1284-201ENST00000408337 120 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 RN7SKP159-201ENST00000410657 292 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 USP9YP33-201ENST00000412220 421 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 RPS3AP9-201ENST00000417027 792 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AL593851.1-201ENST00000426171 157 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 RPL7P2-201ENST00000427639 268 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 RPS6P15-201ENST00000431996 751 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC007389.2-201ENST00000434630 306 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 USP9YP35-201ENST00000435696 412 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 RPL23AP16-201ENST00000441715 421 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 MTND5P2-201ENST00000442927 1142 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 SETD6P1-201ENST00000444575 317 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 NPM1P49-201ENST00000448027 714 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 FABP3P2-201ENST00000453169 399 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 DDX39BP2-208ENST00000453923 258 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 ANP32BP2-201ENST00000454525 545 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 CEACAMP4-201ENST00000457676 421 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 PLGLA-201ENST00000465668 449 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC105137.1-201ENST00000484355 562 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 XKRY-201ENST00000510392 1100 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC005798.1-201ENST00000513715 387 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 SNORA70.14-201ENST00000516205 110 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC008802.1-201ENST00000519121 791 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 IGLV3-26-201ENST00000520756 302 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 OR5BC1P-201ENST00000529327 739 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 ZNF705CP-201ENST00000530515 889 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms