Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU1-68P-201ENST00000615382 146 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 U1.39-201ENST00000621562 146 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 U4.6-201ENST00000621618 127 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX4Q33E94 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RFX4Q33E94 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 AC046144.1-201ENST00000478559 1853 ntBASIC3.13□□□□□ -1.91
RFX4Q33E94 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.13□□□□□ -1.91
RFX4Q33E94 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFX4Q33E94 MTCO1P6-201ENST00000481192 1384 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RFX4Q33E94 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX4Q33E94 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RFX4Q33E94 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX4Q33E94 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFX4Q33E94 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX4Q33E94 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX4Q33E94 RNU6-600P-201ENST00000362524 99 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 RN7SKP280-201ENST00000364196 304 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 SNORD3H-201ENST00000384486 214 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AL355379.1-201ENST00000405542 640 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX4Q33E94 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX4Q33E94 DBIP2-201ENST00000419076 262 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AC244098.2-201ENST00000422068 99 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX4Q33E94 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFX4Q33E94 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX4Q33E94 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX4Q33E94 CST9LP2-201ENST00000437612 320 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 HMGB1P12-201ENST00000438594 598 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AC000041.1-201ENST00000439655 175 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX4Q33E94 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX4Q33E94 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX4Q33E94 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX4Q33E94 RNU7-140P-201ENST00000459546 60 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX4Q33E94 RPL7L1P13-201ENST00000511702 739 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 RNU5A-7P-201ENST00000515979 116 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 SNORA70.18-201ENST00000516696 98 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 SCARNA20.6-201ENST00000517251 106 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX4Q33E94 RPL12P22-201ENST00000519073 490 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX4Q33E94 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.12□□□□□ -1.91
RFX4Q33E94 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX4Q33E94 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RFX4Q33E94 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.12□□□□□ -1.91
RFX4Q33E94 EIF5A2P1-201ENST00000564027 460 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AC090616.5-202ENST00000582111 297 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX4Q33E94 AL020997.3-201ENST00000602843 359 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 MTATP6P2-201ENST00000603319 678 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AC010591.1-201ENST00000603941 649 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AC091488.1-201ENST00000604239 660 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX4Q33E94 AL391497.1-201ENST00000608671 547 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 FAM157B-203ENST00000639350 358 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX4Q33E94 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
RFX4Q33E94 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFX4Q33E94 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX4Q33E94 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX4Q33E94 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.12□□□□□ -1.91
RFX4Q33E94 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RFX4Q33E94 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RFX4Q33E94 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RFX4Q33E94 AC107081.3-201ENST00000612715 2034 ntBASIC3.12□□□□□ -1.91
RFX4Q33E94 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.11□□□□□ -1.91
RFX4Q33E94 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFX4Q33E94 MAPK10-362ENST00000641864 4484 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFX4Q33E94 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFX4Q33E94 RNA5SP295-201ENST00000362655 121 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.11□□□□□ -1.91
RFX4Q33E94 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RFX4Q33E94 AL445189.1-201ENST00000405722 338 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 RPL23AP47-201ENST00000408017 460 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX4Q33E94 NUP35P2-201ENST00000416748 943 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.11□□□□□ -1.91
RFX4Q33E94 RPS15AP40-201ENST00000419621 391 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFX4Q33E94 AL009174.1-201ENST00000426577 416 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 TRIAP1P1-201ENST00000427062 225 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 RPL23AP69-201ENST00000431134 458 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.11□□□□□ -1.91
RFX4Q33E94 AC009969.1-201ENST00000438726 172 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 AL590399.6-201ENST00000446396 307 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 OR51B8P-201ENST00000449892 769 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 SLC31A1P1-201ENST00000451221 567 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 BX276092.4-201ENST00000452056 248 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 CDC42P1-201ENST00000456658 548 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 SNORD105B-201ENST00000458770 79 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 VN1R17P-201ENST00000472048 1090 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 RPL23AP55-201ENST00000498163 452 ntBASIC3.11□□□□□ -1.91
RFX4Q33E94 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFX4Q33E94 AC112198.1-201ENST00000505369 1220 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms