Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 HMGN1P5-201ENST00000448591 263 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AP001486.1-201ENST00000463339 476 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AL136126.1-201ENST00000473603 402 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AL049873.1-201ENST00000480540 376 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 FCF1P8-201ENST00000510322 597 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AC104115.2-201ENST00000523026 687 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 CKS1BP3-201ENST00000600888 237 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 MIR486-1-201ENST00000612171 68 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AC009464.1-201ENST00000615731 469 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AC046144.1-201ENST00000478559 1853 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AC005183.1-201ENST00000603687 1979 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 MTCO1P4-201ENST00000520516 1409 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 GNG5P1-201ENST00000255500 204 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC007390.1-201ENST00000415722 356 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AL512637.2-201ENST00000431287 1256 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 DNAJC19P8-201ENST00000452887 259 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC010307.1-201ENST00000467206 836 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC023598.1-201ENST00000472521 361 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 NCOR1P1-202ENST00000486162 291 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 IGHV3-29-201ENST00000604817 344 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AL137843.1-201ENST00000605078 385 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AL034351.1-201ENST00000605288 668 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC096586.1-201ENST00000610267 561 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC024595.1-201ENST00000623088 387 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 AC104446.1-201ENST00000613728 1321 ntBASIC3.95□□□□□ -1.78
SHROOM1Q2M3G4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AP001486.2-201ENST00000561652 5113 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 RNU1-70P-201ENST00000362618 164 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AL121972.1-201ENST00000402023 252 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AL391417.1-201ENST00000404100 426 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AP000567.1-201ENST00000406413 156 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 SNORA11C-201ENST00000408532 129 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 RHEBP3-201ENST00000411920 351 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 SKP1P1-201ENST00000438081 489 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AL096803.2-201ENST00000450032 677 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AC097262.1-201ENST00000452559 548 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 RN7SL93P-201ENST00000463035 293 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 VN1R17P-201ENST00000472048 1090 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 RN7SKP283-201ENST00000517197 270 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AC010306.1-201ENST00000523223 1117 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AL121576.1-201ENST00000556055 276 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 MTATP6P2-201ENST00000603319 678 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 AC138932.5-201ENST00000617759 563 ntBASIC3.94□□□□□ -1.78
SHROOM1Q2M3G4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms