Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RNU6-751P-201ENST00000516382 101 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.21□□□□□ -1.74
PTCH1Q13635 OR4U1P-201ENST00000554958 912 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 AL161713.1-201ENST00000555538 145 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 ATP5F1P7-201ENST00000567330 760 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 AC008507.1-201ENST00000587506 734 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 VN1R78P-201ENST00000597393 564 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 AC242628.1-201ENST00000606810 391 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTCH1Q13635 AC067852.7-201ENST00000623270 535 ntBASIC4.21□□□□□ -1.74
PTCH1Q13635 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCH1Q13635 GTF2H2B-203ENST00000508065 1432 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PTCH1Q13635 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTCH1Q13635 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTCH1Q13635 RNU6-851P-201ENST00000384565 107 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 AL031736.2-201ENST00000426573 787 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.2□□□□□ -1.74
PTCH1Q13635 AL590623.1-201ENST00000427864 105 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 ELOCP11-201ENST00000436690 332 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 AC114878.1-201ENST00000441166 358 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.2□□□□□ -1.74
PTCH1Q13635 ELOCP16-201ENST00000444494 332 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 RSL24D1P2-201ENST00000445584 366 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.2□□□□□ -1.74
PTCH1Q13635 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.2□□□□□ -1.74
PTCH1Q13635 RNU1-143P-201ENST00000516296 146 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.2□□□□□ -1.74
PTCH1Q13635 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.2□□□□□ -1.74
PTCH1Q13635 POLR2KP1-201ENST00000553226 168 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.2□□□□□ -1.74
PTCH1Q13635 CYCSP39-201ENST00000565821 309 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 MTND4LP24-201ENST00000572277 291 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 MIR4524B-201ENST00000581569 115 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.2□□□□□ -1.74
PTCH1Q13635 AP003117.1-201ENST00000602771 554 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 U1.23-201ENST00000610293 146 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 RNU1-68P-201ENST00000615382 146 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 U1.39-201ENST00000621562 146 ntBASIC4.2□□□□□ -1.74
PTCH1Q13635 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCH1Q13635 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PTCH1Q13635 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCH1Q13635 AL672167.1-206ENST00000356293 943 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 RPL21P40-201ENST00000428586 483 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 AC022018.1-201ENST00000430685 241 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCH1Q13635 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCH1Q13635 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.19□□□□□ -1.74
PTCH1Q13635 AC006539.3-201ENST00000454258 129 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 RPS20P32-201ENST00000456044 356 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 AC104687.1-201ENST00000485829 412 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 AC025459.1-201ENST00000504072 156 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCH1Q13635 RNU6-1231P-201ENST00000517185 103 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCH1Q13635 AC092851.1-201ENST00000535964 478 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.19□□□□□ -1.74
PTCH1Q13635 AC079600.2-201ENST00000550076 130 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.19□□□□□ -1.74
PTCH1Q13635 AC008121.2-201ENST00000614647 523 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 AC104820.1-201ENST00000624183 307 ntBASIC4.19□□□□□ -1.74
PTCH1Q13635 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
PTCH1Q13635 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTCH1Q13635 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTCH1Q13635 AL139811.1-201ENST00000424779 2299 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCH1Q13635 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTCH1Q13635 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTCH1Q13635 SNORA9.2-201ENST00000365361 133 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 RN7SKP285-201ENST00000410137 318 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 RNU4-74P-201ENST00000411280 161 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 RNA5SP508-201ENST00000411327 119 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 FO393419.3-201ENST00000428741 282 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 ISCA1P2-201ENST00000438679 421 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 HMGB3P11-201ENST00000440127 604 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.18□□□□□ -1.74
PTCH1Q13635 IGKV2-36-201ENST00000519999 223 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.18□□□□□ -1.74
PTCH1Q13635 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.18□□□□□ -1.74
PTCH1Q13635 PCNAP1-202ENST00000595299 752 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 U6.48-201ENST00000618523 106 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 AC073476.4-201ENST00000628409 72 ntBASIC4.18□□□□□ -1.74
PTCH1Q13635 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCH1Q13635 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTCH1Q13635 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PTCH1Q13635 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.17□□□□□ -1.74
PTCH1Q13635 AL049780.3-201ENST00000624612 1583 ntBASIC4.17□□□□□ -1.74
PTCH1Q13635 AC021755.1-201ENST00000559747 1447 ntBASIC4.17□□□□□ -1.74
PTCH1Q13635 RNU1-75P-201ENST00000347264 129 ntBASIC4.17□□□□□ -1.74
PTCH1Q13635 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.17□□□□□ -1.74
PTCH1Q13635 RPS12P23-201ENST00000419579 400 ntBASIC4.17□□□□□ -1.74
PTCH1Q13635 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.17□□□□□ -1.74
PTCH1Q13635 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.17□□□□□ -1.74
PTCH1Q13635 RPL30P11-201ENST00000495304 339 ntBASIC4.17□□□□□ -1.74
PTCH1Q13635 AC114967.1-201ENST00000504890 259 ntBASIC4.17□□□□□ -1.74
PTCH1Q13635 AC106734.1-201ENST00000568646 663 ntBASIC4.17□□□□□ -1.74
PTCH1Q13635 AC138761.3-201ENST00000579993 334 ntBASIC4.17□□□□□ -1.74
PTCH1Q13635 CR589904.2-201ENST00000612533 440 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms