Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL627224.1-201ENST00000448334 444 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 AC112492.1-201ENST00000449607 712 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 RPS17P11-201ENST00000474297 293 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 OR52A4P-203ENST00000498233 1014 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
FOXF1Q12946 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC2.66□□□□□ -1.98
FOXF1Q12946 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXF1Q12946 AC016550.3-201ENST00000515706 767 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 RN7SKP43-201ENST00000516173 320 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 SNORA74D-201ENST00000516404 141 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 RNU6-1308P-201ENST00000516817 103 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 AC022080.3-201ENST00000544433 482 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 OR4U1P-201ENST00000554958 912 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXF1Q12946 AC055764.2-201ENST00000610089 670 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.66□□□□□ -1.98
FOXF1Q12946 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXF1Q12946 ZNF833P-201ENST00000424938 1494 ntBASIC2.65□□□□□ -1.98
FOXF1Q12946 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
FOXF1Q12946 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.65□□□□□ -1.98
FOXF1Q12946 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
FOXF1Q12946 RNU6-31P-201ENST00000384388 108 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 U3.42-201ENST00000408746 214 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXF1Q12946 NDUFA5P10-201ENST00000432147 357 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 MTCO1P57-201ENST00000432182 261 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 NANOGNBP1-201ENST00000448444 480 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 AL162389.1-201ENST00000449233 177 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 RPL21P41-201ENST00000459863 264 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.65□□□□□ -1.99
FOXF1Q12946 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.65□□□□□ -1.99
FOXF1Q12946 PCNAP1-201ENST00000505363 709 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.65□□□□□ -1.99
FOXF1Q12946 AC010374.2-201ENST00000512933 535 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXF1Q12946 OR4V1P-201ENST00000525394 1140 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXF1Q12946 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.65□□□□□ -1.99
FOXF1Q12946 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.65□□□□□ -1.99
FOXF1Q12946 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.65□□□□□ -1.99
FOXF1Q12946 AC117529.2-201ENST00000512159 2068 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 AC118273.1-201ENST00000525324 3006 ntBASIC2.65□□□□□ -1.99
FOXF1Q12946 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.65□□□□□ -1.99
FOXF1Q12946 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXF1Q12946 MTCO1P8-201ENST00000416914 1523 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AL353743.4-201ENST00000422653 1547 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXF1Q12946 GNG5P1-201ENST00000255500 204 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 OR5H2-201ENST00000355273 945 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
FOXF1Q12946 SNORA51.4-201ENST00000364993 124 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 RNU6-317P-201ENST00000384031 107 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 RNU6-185P-201ENST00000384421 107 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 SNORA48.2-201ENST00000390926 124 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 RPL31P1-201ENST00000398116 372 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 RN7SKP58-201ENST00000411010 305 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.64□□□□□ -1.99
FOXF1Q12946 PRELID3BP11-201ENST00000414230 479 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AC008280.1-201ENST00000418851 412 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 RPL31P45-201ENST00000419532 356 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AL031736.2-201ENST00000426573 787 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 TRIAP1P1-201ENST00000427062 225 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 ELOCP6-201ENST00000429066 328 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.64□□□□□ -1.99
FOXF1Q12946 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXF1Q12946 AC140076.1-201ENST00000449897 361 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 ELOCP12-201ENST00000458706 328 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AC091179.1-201ENST00000461606 579 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 RPS29P26-201ENST00000477483 171 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 SCGB1D5P-201ENST00000515134 247 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXF1Q12946 AC107016.2-201ENST00000547968 190 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.64□□□□□ -1.99
FOXF1Q12946 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXF1Q12946 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.64□□□□□ -1.99
FOXF1Q12946 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.64□□□□□ -1.99
FOXF1Q12946 AC245128.3-201ENST00000594721 748 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.64□□□□□ -1.99
FOXF1Q12946 MIMT1-201ENST00000597105 1050 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AC007566.2-201ENST00000603642 413 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AC009032.1-201ENST00000617574 431 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AC022509.4-201ENST00000621404 572 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AC091953.5-201ENST00000622919 233 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AC009039.2-201ENST00000624524 529 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 AC048347.1-201ENST00000624621 427 ntBASIC2.64□□□□□ -1.99
FOXF1Q12946 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.64□□□□□ -1.99
FOXF1Q12946 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
FOXF1Q12946 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
FOXF1Q12946 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
FOXF1Q12946 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FOXF1Q12946 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
FOXF1Q12946 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
FOXF1Q12946 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
FOXF1Q12946 RNU4-31P-201ENST00000384211 141 ntBASIC2.63□□□□□ -1.99
FOXF1Q12946 HSPE1P26-201ENST00000405341 275 ntBASIC2.63□□□□□ -1.99
FOXF1Q12946 RNA5SP344-201ENST00000411081 104 ntBASIC2.63□□□□□ -1.99
FOXF1Q12946 RFESDP1-201ENST00000422350 461 ntBASIC2.63□□□□□ -1.99
FOXF1Q12946 AC006994.1-201ENST00000438212 839 ntBASIC2.63□□□□□ -1.99
FOXF1Q12946 RPS27P5-201ENST00000444247 244 ntBASIC2.63□□□□□ -1.99
FOXF1Q12946 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms