Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 ATP5F1P7-201ENST00000567330 760 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 MIR5186-201ENST00000577504 120 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC053481.3-201ENST00000577881 843 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC090425.2-201ENST00000608818 501 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC005156.1-201ENST00000613371 573 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 AP003400.6-201ENST00000624698 740 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 AC092184.1-201ENST00000625042 715 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 U6.105-201ENST00000637379 88 ntBASIC3.15□□□□□ -1.91
HMGCS1Q01581 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HMGCS1Q01581 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.91
HMGCS1Q01581 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 MTCO1P12-201ENST00000414273 1543 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGCS1Q01581 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HMGCS1Q01581 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGCS1Q01581 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AP000567.1-201ENST00000406413 156 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 RNA5SP229-201ENST00000410809 99 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 RPS3AP25-201ENST00000411660 793 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 RPS7P15-201ENST00000415804 584 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC006960.1-201ENST00000419980 153 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 YME1L1P1-201ENST00000429435 297 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 UBE2V1P6-201ENST00000430840 422 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AL159987.2-201ENST00000432754 307 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AP000949.1-201ENST00000438328 629 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 HMGB1P48-201ENST00000446155 598 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AL590399.6-201ENST00000446396 307 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 Z99127.3-201ENST00000448158 395 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 snoU13.7-201ENST00000459220 104 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC093663.1-201ENST00000497190 394 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC021678.1-201ENST00000505195 936 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC010306.1-201ENST00000523223 1117 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AP000619.3-201ENST00000535634 1127 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AP003717.3-201ENST00000544832 1180 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 MIR4276-201ENST00000584832 70 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC011492.1-201ENST00000600023 315 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC009948.4-201ENST00000604692 675 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC084824.5-201ENST00000612009 413 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AL359535.1-201ENST00000612100 1087 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AL355365.1-201ENST00000616480 294 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 PLCE1P1-201ENST00000622094 305 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC091903.1-201ENST00000624322 454 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 AC073476.4-201ENST00000628409 72 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGCS1Q01581 SRP72P2-201ENST00000344851 1979 ntBASIC3.14□□□□□ -1.91
HMGCS1Q01581 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGCS1Q01581 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HMGCS1Q01581 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGCS1Q01581 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HMGCS1Q01581 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 RNA5SP383-201ENST00000362934 120 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 MIR607-201ENST00000385241 96 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AL512637.2-201ENST00000431287 1256 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 RPL21P112-201ENST00000434403 463 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGCS1Q01581 AC006994.1-201ENST00000438212 839 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 UBE2V1P5-201ENST00000440070 405 ntBASIC3.13□□□□□ -1.91
HMGCS1Q01581 AL158053.1-201ENST00000441503 453 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms