Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CX3CL1P78423 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.52□□□□□ -1.85
CX3CL1P78423 MTND4P16-201ENST00000466108 1367 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 AL031985.3-201ENST00000565390 2449 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CL1P78423 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CL1P78423 RNA5SP502-201ENST00000362694 119 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CX3CL1P78423 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CX3CL1P78423 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CL1P78423 MIR129-1-201ENST00000384972 72 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 RNA5SP332-201ENST00000391063 115 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 RPL37P18-201ENST00000411602 243 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 RPS20P14-201ENST00000412545 360 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 RPEP3-201ENST00000425462 676 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 RPL23AP1-201ENST00000428990 471 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 MTCYBP45-201ENST00000435243 565 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 SETP8-201ENST00000435341 628 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CL1P78423 SDCBPP1-201ENST00000440192 890 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 UBE2D3P4-201ENST00000441973 436 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 RPS27AP8-201ENST00000452665 445 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 ZNF114P1-201ENST00000453500 292 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 MTND2P28-201ENST00000457540 1044 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AP001992.1-205ENST00000462248 379 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 RPL21P126-201ENST00000470049 478 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC017015.1-201ENST00000477387 286 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 RPS23P1-201ENST00000491662 432 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC092045.1-201ENST00000495716 1231 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC083829.1-201ENST00000503756 657 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CL1P78423 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CL1P78423 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CL1P78423 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.52□□□□□ -1.85
CX3CL1P78423 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.52□□□□□ -1.85
CX3CL1P78423 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CL1P78423 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.52□□□□□ -1.85
CX3CL1P78423 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CL1P78423 RPL12P25-202ENST00000598100 674 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC110760.3-201ENST00000598794 467 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC068790.5-201ENST00000602741 355 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 IGHV3-29-201ENST00000604817 344 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC010201.1-201ENST00000605051 540 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 AC106028.5-201ENST00000610332 395 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC012409.3-201ENST00000611343 981 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 RN7SL722P-201ENST00000617780 284 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 RN7SL565P-201ENST00000618246 284 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC091931.1-201ENST00000623488 728 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC007546.2-201ENST00000623996 360 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.52□□□□□ -1.85
CX3CL1P78423 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.52□□□□□ -1.85
CX3CL1P78423 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CL1P78423 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CL1P78423 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CX3CL1P78423 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CL1P78423 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.52□□□□□ -1.85
CX3CL1P78423 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CX3CL1P78423 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CX3CL1P78423 AC016588.2-201ENST00000632484 3021 ntBASIC3.52□□□□□ -1.85
CX3CL1P78423 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CL1P78423 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CL1P78423 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CL1P78423 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CL1P78423 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CL1P78423 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CX3CL1P78423 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CX3CL1P78423 RNU1-15P-201ENST00000353977 144 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 RNU6-28P-201ENST00000362378 107 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 RNA5SP307-201ENST00000362863 116 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 SNORD51-201ENST00000384320 80 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AL021407.1-201ENST00000404531 386 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 RPS4XP9-201ENST00000405151 780 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CL1P78423 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CL1P78423 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CL1P78423 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.51□□□□□ -1.85
CX3CL1P78423 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.51□□□□□ -1.85
CX3CL1P78423 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.51□□□□□ -1.85
CX3CL1P78423 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CL1P78423 EZH2P1-201ENST00000431167 291 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 LSM1P1-201ENST00000438629 273 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 ISCA1P2-201ENST00000438679 421 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.51□□□□□ -1.85
CX3CL1P78423 PAXBP1P1-201ENST00000449315 447 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 NDUFA12P1-201ENST00000455914 406 ntBASIC3.51□□□□□ -1.85
CX3CL1P78423 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms