Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RPL31P1-201ENST00000398116 372 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 MIR887-201ENST00000401258 79 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 MTATP6P31-201ENST00000406985 692 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 RNA5SP120-201ENST00000410900 112 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 AC109780.2-201ENST00000413467 845 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 AL158156.1-201ENST00000422509 473 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 Z77249.1-201ENST00000444622 1175 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H3AP68431 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 PRDX3P4-201ENST00000470828 747 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 RN7SL601P-201ENST00000471221 293 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 RPS26P21-201ENST00000475397 348 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 AP000926.3-201ENST00000497201 299 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 RNU6-711P-201ENST00000517255 106 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 AC109635.4-202ENST00000531666 412 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 MIR5680-201ENST00000577577 84 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 RN7SL339P-201ENST00000580597 296 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 AC138473.1-201ENST00000605717 526 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 AC135803.1-201ENST00000608748 565 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 AL359535.1-201ENST00000612100 1087 ntBASIC2.71□□□□□ -1.98
HIST1H3AP68431 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H3AP68431 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.71□□□□□ -1.98
HIST1H3AP68431 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HIST1H3AP68431 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HIST1H3AP68431 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC117529.2-201ENST00000512159 2068 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HIST1H3AP68431 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
HIST1H3AP68431 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 RNU4-31P-201ENST00000384211 141 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 U3.19-201ENST00000390893 196 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 MTCYBP24-201ENST00000420387 1106 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 HMGB1P48-201ENST00000446155 598 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 GAPDHP27-201ENST00000447427 1020 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC140076.1-201ENST00000449897 361 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC107398.1-201ENST00000486904 505 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 RN7SL20P-201ENST00000488827 297 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 RPL21P129-201ENST00000491732 478 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC111193.1-201ENST00000504097 155 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC239860.2-201ENST00000525886 270 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC007536.1-201ENST00000533382 349 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC055876.1-202ENST00000567053 138 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 MIR5004-201ENST00000579078 107 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 MIR4429-201ENST00000580105 73 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC005412.1-201ENST00000580812 1049 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 PRELID3BP8-201ENST00000604148 295 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC105227.2-201ENST00000615075 605 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 AL590240.3-201ENST00000621416 943 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.7□□□□□ -1.98
HIST1H3AP68431 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.7□□□□□ -1.98
HIST1H3AP68431 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.69□□□□□ -1.98
HIST1H3AP68431 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.69□□□□□ -1.98
HIST1H3AP68431 AL353743.1-202ENST00000431724 1695 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 AL355578.1-201ENST00000607405 1328 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 MTND5P19-201ENST00000424872 1794 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HIST1H3AP68431 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.69□□□□□ -1.98
HIST1H3AP68431 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HIST1H3AP68431 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HIST1H3AP68431 AC073325.2-201ENST00000339545 159 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 RNU6-50P-201ENST00000362356 103 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 SNORA63.1-201ENST00000362493 131 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 RNA5SP72-201ENST00000364442 117 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HIST1H3AP68431 RNU6-1181P-201ENST00000384191 106 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 RPL7P25-201ENST00000404151 721 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 AC245054.2-201ENST00000415639 319 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.69□□□□□ -1.98
HIST1H3AP68431 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HIST1H3AP68431 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.69□□□□□ -1.98
HIST1H3AP68431 YWHAZP7-201ENST00000436906 631 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 AC091862.1-201ENST00000438016 1100 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 AC006028.1-201ENST00000438379 402 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 AL591503.2-201ENST00000442314 1005 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 ELOCP13-201ENST00000443934 329 ntBASIC2.69□□□□□ -1.98
HIST1H3AP68431 UQCRHP3-201ENST00000451503 251 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms