Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNU6-1151P-201ENST00000384684 107 ntBASIC3.4□□□□□ -1.87
CDH6P55285 MIR183-201ENST00000384958 110 ntBASIC3.4□□□□□ -1.87
CDH6P55285 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CDH6P55285 SNORA48.7-201ENST00000391302 135 ntBASIC3.4□□□□□ -1.87
CDH6P55285 SNORA48.8-201ENST00000391324 134 ntBASIC3.4□□□□□ -1.87
CDH6P55285 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH6P55285 ATP5F1P6-201ENST00000402768 767 ntBASIC3.4□□□□□ -1.87
CDH6P55285 RNA5SP44-201ENST00000410446 133 ntBASIC3.4□□□□□ -1.87
CDH6P55285 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH6P55285 RPS7P13-201ENST00000413955 498 ntBASIC3.4□□□□□ -1.87
CDH6P55285 OR1AA1P-201ENST00000419597 916 ntBASIC3.4□□□□□ -1.87
CDH6P55285 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH6P55285 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH6P55285 AL672296.1-201ENST00000427780 2158 ntBASIC3.4□□□□□ -1.87
CDH6P55285 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.4□□□□□ -1.87
CDH6P55285 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH6P55285 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH6P55285 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH6P55285 RPL21P10-201ENST00000463521 490 ntBASIC3.4□□□□□ -1.87
CDH6P55285 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH6P55285 HMGB1P38-201ENST00000490557 577 ntBASIC3.4□□□□□ -1.87
CDH6P55285 AC021678.1-201ENST00000505195 936 ntBASIC3.4□□□□□ -1.87
CDH6P55285 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH6P55285 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH6P55285 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH6P55285 SNORA64.4-201ENST00000516632 81 ntBASIC3.4□□□□□ -1.87
CDH6P55285 AC104027.1-201ENST00000521887 300 ntBASIC3.4□□□□□ -1.87
CDH6P55285 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.4□□□□□ -1.87
CDH6P55285 AC011611.1-201ENST00000552179 197 ntBASIC3.4□□□□□ -1.87
CDH6P55285 MIR1254-2-201ENST00000579553 63 ntBASIC3.4□□□□□ -1.87
CDH6P55285 MIR3690-201ENST00000580266 75 ntBASIC3.4□□□□□ -1.87
CDH6P55285 AC012254.4-201ENST00000588843 273 ntBASIC3.4□□□□□ -1.87
CDH6P55285 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH6P55285 KATNBL1P5-201ENST00000605015 517 ntBASIC3.4□□□□□ -1.87
CDH6P55285 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CDH6P55285 MIR6075-201ENST00000620782 95 ntBASIC3.4□□□□□ -1.87
CDH6P55285 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH6P55285 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH6P55285 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CDH6P55285 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH6P55285 Z83843.1-201ENST00000604070 3685 ntBASIC3.4□□□□□ -1.87
CDH6P55285 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH6P55285 MTCO1P12-201ENST00000414273 1543 ntBASIC3.39□□□□□ -1.87
CDH6P55285 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH6P55285 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDH6P55285 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH6P55285 AL359893.1-201ENST00000447628 1580 ntBASIC3.39□□□□□ -1.87
CDH6P55285 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CDH6P55285 RPL7P26-201ENST00000333817 754 ntBASIC3.39□□□□□ -1.87
CDH6P55285 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.39□□□□□ -1.87
CDH6P55285 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH6P55285 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH6P55285 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH6P55285 MIR7-3-201ENST00000384898 110 ntBASIC3.39□□□□□ -1.87
CDH6P55285 RNU6-796P-201ENST00000391086 107 ntBASIC3.39□□□□□ -1.87
CDH6P55285 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH6P55285 AL138880.1-201ENST00000405824 642 ntBASIC3.39□□□□□ -1.87
CDH6P55285 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH6P55285 RNA5SP229-201ENST00000410809 99 ntBASIC3.39□□□□□ -1.87
CDH6P55285 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH6P55285 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH6P55285 AC044797.1-201ENST00000445744 679 ntBASIC3.39□□□□□ -1.87
CDH6P55285 AC115115.1-201ENST00000449927 248 ntBASIC3.39□□□□□ -1.87
CDH6P55285 BX248409.1-201ENST00000455497 255 ntBASIC3.39□□□□□ -1.87
CDH6P55285 NF1P3-201ENST00000457709 450 ntBASIC3.39□□□□□ -1.87
CDH6P55285 RPL5P24-201ENST00000463742 885 ntBASIC3.39□□□□□ -1.87
CDH6P55285 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH6P55285 AP002884.2-201ENST00000471647 395 ntBASIC3.39□□□□□ -1.87
CDH6P55285 RPL23AP44-201ENST00000482216 473 ntBASIC3.39□□□□□ -1.87
CDH6P55285 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.39□□□□□ -1.87
CDH6P55285 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
CDH6P55285 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH6P55285 RNU6-202P-201ENST00000515998 96 ntBASIC3.39□□□□□ -1.87
CDH6P55285 RN7SKP244-201ENST00000516513 307 ntBASIC3.39□□□□□ -1.87
CDH6P55285 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.39□□□□□ -1.87
CDH6P55285 UBE2NP1-201ENST00000545592 458 ntBASIC3.39□□□□□ -1.87
CDH6P55285 CCNG2P1-201ENST00000549521 1000 ntBASIC3.39□□□□□ -1.87
CDH6P55285 SYF2P1-201ENST00000550658 413 ntBASIC3.39□□□□□ -1.87
CDH6P55285 NCAPGP2-201ENST00000557911 754 ntBASIC3.39□□□□□ -1.87
CDH6P55285 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH6P55285 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH6P55285 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.39□□□□□ -1.87
CDH6P55285 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH6P55285 VN1R88P-201ENST00000596787 292 ntBASIC3.39□□□□□ -1.87
CDH6P55285 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH6P55285 AL365400.2-201ENST00000605604 902 ntBASIC3.39□□□□□ -1.87
CDH6P55285 AC011816.2-201ENST00000607089 556 ntBASIC3.39□□□□□ -1.87
CDH6P55285 AL163051.2-201ENST00000618976 735 ntBASIC3.39□□□□□ -1.87
CDH6P55285 AC092184.1-201ENST00000625042 715 ntBASIC3.39□□□□□ -1.87
CDH6P55285 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH6P55285 AC073476.4-201ENST00000628409 72 ntBASIC3.39□□□□□ -1.87
CDH6P55285 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH6P55285 U6.105-201ENST00000637379 88 ntBASIC3.39□□□□□ -1.87
CDH6P55285 MIR7153-201ENST00000637758 57 ntBASIC3.39□□□□□ -1.87
CDH6P55285 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.39□□□□□ -1.87
CDH6P55285 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.39□□□□□ -1.87
CDH6P55285 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDH6P55285 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDH6P55285 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDH6P55285 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms