Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.04□□□□□ -1.76
MSH6P52701 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
MSH6P52701 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MSH6P52701 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.04□□□□□ -1.76
MSH6P52701 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MSH6P52701 AC011155.1-201ENST00000316512 456 ntBASIC4.03□□□□□ -1.76
MSH6P52701 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MSH6P52701 RPS6P12-201ENST00000432491 726 ntBASIC4.03□□□□□ -1.76
MSH6P52701 AC245517.2-201ENST00000442890 346 ntBASIC4.03□□□□□ -1.76
MSH6P52701 RNU6-775P-201ENST00000459318 96 ntBASIC4.03□□□□□ -1.76
MSH6P52701 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MSH6P52701 PRELID3BP7-201ENST00000503606 469 ntBASIC4.03□□□□□ -1.76
MSH6P52701 AC008837.1-201ENST00000511513 412 ntBASIC4.03□□□□□ -1.76
MSH6P52701 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.03□□□□□ -1.76
MSH6P52701 FABP5P12-201ENST00000515543 389 ntBASIC4.03□□□□□ -1.76
MSH6P52701 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.03□□□□□ -1.76
MSH6P52701 RNU6-751P-201ENST00000516382 101 ntBASIC4.03□□□□□ -1.76
MSH6P52701 AC067904.2-201ENST00000517322 1283 ntBASIC4.03□□□□□ -1.76
MSH6P52701 AP001646.1-201ENST00000527936 915 ntBASIC4.03□□□□□ -1.76
MSH6P52701 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MSH6P52701 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.03□□□□□ -1.76
MSH6P52701 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MSH6P52701 MIR6817-201ENST00000615588 66 ntBASIC4.03□□□□□ -1.76
MSH6P52701 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.03□□□□□ -1.76
MSH6P52701 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
MSH6P52701 SKINT1L-201ENST00000401057 817 ntBASIC4.02□□□□□ -1.77
MSH6P52701 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 AC022022.1-201ENST00000430304 178 ntBASIC4.02□□□□□ -1.77
MSH6P52701 MTCYBP29-201ENST00000436327 1006 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC112653.1-201ENST00000443851 386 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC021205.1-201ENST00000468797 348 ntBASIC4.02□□□□□ -1.77
MSH6P52701 CYCSP20-201ENST00000473154 315 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC008565.1-201ENST00000509046 885 ntBASIC4.02□□□□□ -1.77
MSH6P52701 USP9YP5-201ENST00000511770 630 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
MSH6P52701 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH6P52701 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.02□□□□□ -1.77
MSH6P52701 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MSH6P52701 ZNF658B-202ENST00000615961 3375 ntBASIC4.02□□□□□ -1.77
MSH6P52701 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.02□□□□□ -1.77
MSH6P52701 MIR7-1-201ENST00000384871 110 ntBASIC4.02□□□□□ -1.77
MSH6P52701 SNORA3.2-201ENST00000408221 125 ntBASIC4.02□□□□□ -1.77
MSH6P52701 RPS7P13-201ENST00000413955 498 ntBASIC4.02□□□□□ -1.77
MSH6P52701 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.02□□□□□ -1.77
MSH6P52701 FAR1P1-201ENST00000427163 934 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 snoU13.23-201ENST00000458863 104 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC104629.2-201ENST00000468627 598 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH6P52701 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 RNU6-491P-201ENST00000516099 110 ntBASIC4.02□□□□□ -1.77
MSH6P52701 RN7SKP283-201ENST00000517197 270 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC104027.1-201ENST00000521887 300 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MSH6P52701 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 AC079089.3-201ENST00000603094 673 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH6P52701 AP004607.9-201ENST00000618202 316 ntBASIC4.02□□□□□ -1.77
MSH6P52701 PLCE1P1-201ENST00000622094 305 ntBASIC4.02□□□□□ -1.77
MSH6P52701 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH6P52701 MIR6715B-201ENST00000637172 77 ntBASIC4.02□□□□□ -1.77
MSH6P52701 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH6P52701 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MSH6P52701 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MSH6P52701 AC134882.1-201ENST00000603738 1676 ntBASIC4.01□□□□□ -1.77
MSH6P52701 FAM133CP-201ENST00000332869 704 ntBASIC4.01□□□□□ -1.77
MSH6P52701 RPL7P26-201ENST00000333817 754 ntBASIC4.01□□□□□ -1.77
MSH6P52701 RNA5SP68-201ENST00000363885 119 ntBASIC4.01□□□□□ -1.77
MSH6P52701 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MSH6P52701 AC099336.2-201ENST00000422457 254 ntBASIC4.01□□□□□ -1.77
MSH6P52701 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH6P52701 OR5H3P-201ENST00000502817 919 ntBASIC4.01□□□□□ -1.77
MSH6P52701 Y_RNA.676-201ENST00000516393 96 ntBASIC4.01□□□□□ -1.77
MSH6P52701 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH6P52701 NPM1P35-201ENST00000533043 868 ntBASIC4.01□□□□□ -1.77
MSH6P52701 AGGF1P8-201ENST00000562979 1000 ntBASIC4.01□□□□□ -1.77
MSH6P52701 MTCO2P22-201ENST00000603246 681 ntBASIC4.01□□□□□ -1.77
MSH6P52701 AC007318.2-201ENST00000620999 243 ntBASIC4.01□□□□□ -1.77
MSH6P52701 AC067852.7-201ENST00000623270 535 ntBASIC4.01□□□□□ -1.77
MSH6P52701 AC019080.5-201ENST00000624891 757 ntBASIC4.01□□□□□ -1.77
MSH6P52701 AC119674.1-220ENST00000641502 1048 ntBASIC4.01□□□□□ -1.77
MSH6P52701 AC092079.1-201ENST00000558620 1985 ntBASIC4□□□□□ -1.77
MSH6P52701 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4□□□□□ -1.77
MSH6P52701 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4□□□□□ -1.77
MSH6P52701 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4□□□□□ -1.77
MSH6P52701 U3.42-201ENST00000408746 214 ntBASIC4□□□□□ -1.77
MSH6P52701 RN7SKP192-201ENST00000411291 327 ntBASIC4□□□□□ -1.77
MSH6P52701 HNRNPDLP1-201ENST00000412834 550 ntBASIC4□□□□□ -1.77
MSH6P52701 RPL31P12-201ENST00000422587 358 ntBASIC4□□□□□ -1.77
MSH6P52701 MTND2P2-201ENST00000434633 945 ntBASIC4□□□□□ -1.77
MSH6P52701 UBE2D3P1-201ENST00000436669 444 ntBASIC4□□□□□ -1.77
MSH6P52701 RNU7-170P-201ENST00000459303 61 ntBASIC4□□□□□ -1.77
MSH6P52701 RPL23AP14-201ENST00000468281 468 ntBASIC4□□□□□ -1.77
MSH6P52701 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms