Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
MRE11P49959 RNU1-15P-201ENST00000353977 144 ntBASIC5.32□□□□□ -1.56
MRE11P49959 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MRE11P49959 RNU6-1066P-201ENST00000363573 105 ntBASIC5.32□□□□□ -1.56
MRE11P49959 RNU5F-7P-201ENST00000363696 115 ntBASIC5.32□□□□□ -1.56
MRE11P49959 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
MRE11P49959 RNU1-44P-201ENST00000384453 163 ntBASIC5.32□□□□□ -1.56
MRE11P49959 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.32□□□□□ -1.56
MRE11P49959 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.32□□□□□ -1.56
MRE11P49959 RN7SKP222-201ENST00000410651 315 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AL450992.3-201ENST00000413192 568 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.32□□□□□ -1.56
MRE11P49959 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.32□□□□□ -1.56
MRE11P49959 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.32□□□□□ -1.56
MRE11P49959 AC093698.1-201ENST00000423843 571 ntBASIC5.32□□□□□ -1.56
MRE11P49959 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.32□□□□□ -1.56
MRE11P49959 USP9YP18-201ENST00000425912 695 ntBASIC5.32□□□□□ -1.56
MRE11P49959 RPS26P47-201ENST00000427219 348 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.32□□□□□ -1.56
MRE11P49959 MTND3P21-201ENST00000433774 331 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AL359265.2-201ENST00000434367 631 ntBASIC5.32□□□□□ -1.56
MRE11P49959 RPS17P8-201ENST00000434525 335 ntBASIC5.32□□□□□ -1.56
MRE11P49959 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.32□□□□□ -1.56
MRE11P49959 UBE2V1P5-201ENST00000440070 405 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.32□□□□□ -1.56
MRE11P49959 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.32□□□□□ -1.56
MRE11P49959 RPL36AP15-201ENST00000444514 266 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.32□□□□□ -1.56
MRE11P49959 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.32□□□□□ -1.56
MRE11P49959 AC010307.1-201ENST00000467206 836 ntBASIC5.32□□□□□ -1.56
MRE11P49959 HMGN2P25-201ENST00000486956 268 ntBASIC5.32□□□□□ -1.56
MRE11P49959 RPS26P15-201ENST00000488067 348 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MRE11P49959 PARP4P3-201ENST00000510265 317 ntBASIC5.32□□□□□ -1.56
MRE11P49959 RNU6-885P-201ENST00000516607 104 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.32□□□□□ -1.56
MRE11P49959 AC087276.1-201ENST00000529659 480 ntBASIC5.32□□□□□ -1.56
MRE11P49959 DEFB108A-201ENST00000530110 222 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AC107918.3-201ENST00000533272 382 ntBASIC5.32□□□□□ -1.56
MRE11P49959 CYCSP29-201ENST00000533731 318 ntBASIC5.32□□□□□ -1.56
MRE11P49959 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.32□□□□□ -1.56
MRE11P49959 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.32□□□□□ -1.56
MRE11P49959 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
MRE11P49959 AL049839.1-201ENST00000556151 657 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.32□□□□□ -1.56
MRE11P49959 SNORA59B-202ENST00000578183 701 ntBASIC5.32□□□□□ -1.56
MRE11P49959 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.32□□□□□ -1.56
MRE11P49959 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.32□□□□□ -1.56
MRE11P49959 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.32□□□□□ -1.56
MRE11P49959 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC5.32□□□□□ -1.56
MRE11P49959 MIR3158-1-201ENST00000583596 81 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AC083760.1-201ENST00000589621 670 ntBASIC5.32□□□□□ -1.56
MRE11P49959 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.32□□□□□ -1.56
MRE11P49959 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.32□□□□□ -1.56
MRE11P49959 AC010424.2-201ENST00000607594 443 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AP002360.3-201ENST00000607673 710 ntBASIC5.32□□□□□ -1.56
MRE11P49959 AC025253.1-201ENST00000613623 543 ntBASIC5.32□□□□□ -1.56
MRE11P49959 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.32□□□□□ -1.56
MRE11P49959 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
MRE11P49959 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
MRE11P49959 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.32□□□□□ -1.56
MRE11P49959 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.32□□□□□ -1.56
MRE11P49959 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
MRE11P49959 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
MRE11P49959 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
MRE11P49959 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
MRE11P49959 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
MRE11P49959 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.31□□□□□ -1.56
MRE11P49959 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 Y_RNA.554-201ENST00000384672 102 ntBASIC5.31□□□□□ -1.56
MRE11P49959 RPL23AP29-201ENST00000397284 453 ntBASIC5.31□□□□□ -1.56
MRE11P49959 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.31□□□□□ -1.56
MRE11P49959 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
MRE11P49959 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
MRE11P49959 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.31□□□□□ -1.56
MRE11P49959 AL512649.1-201ENST00000428997 581 ntBASIC5.31□□□□□ -1.56
MRE11P49959 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.31□□□□□ -1.56
MRE11P49959 ELOCP10-201ENST00000440624 327 ntBASIC5.31□□□□□ -1.56
MRE11P49959 AC092809.1-201ENST00000441469 474 ntBASIC5.31□□□□□ -1.56
MRE11P49959 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.31□□□□□ -1.56
MRE11P49959 AC133473.1-201ENST00000455173 299 ntBASIC5.31□□□□□ -1.56
MRE11P49959 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
MRE11P49959 RNU7-27P-201ENST00000459281 62 ntBASIC5.31□□□□□ -1.56
MRE11P49959 RPL31P58-201ENST00000469001 379 ntBASIC5.31□□□□□ -1.56
MRE11P49959 OR4G11P-201ENST00000492842 939 ntBASIC5.31□□□□□ -1.56
MRE11P49959 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.31□□□□□ -1.56
MRE11P49959 KRT19P6-201ENST00000510983 209 ntBASIC5.31□□□□□ -1.56
MRE11P49959 AC093840.1-201ENST00000511599 336 ntBASIC5.31□□□□□ -1.56
MRE11P49959 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.31□□□□□ -1.56
MRE11P49959 AP002453.2-201ENST00000533503 320 ntBASIC5.31□□□□□ -1.56
MRE11P49959 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.31□□□□□ -1.56
MRE11P49959 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
MRE11P49959 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.31□□□□□ -1.56
MRE11P49959 AC138915.2-201ENST00000569776 97 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms