Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC010655.1-201ENST00000449336 292 ntBASIC3.91□□□□□ -1.78
LHX1P48742 HMGB3P22-202ENST00000451823 572 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.91□□□□□ -1.78
LHX1P48742 RFC5P1-201ENST00000454419 874 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 RPL21P103-201ENST00000479921 488 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AC106707.2-201ENST00000484182 374 ntBASIC3.91□□□□□ -1.78
LHX1P48742 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.91□□□□□ -1.78
LHX1P48742 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.91□□□□□ -1.78
LHX1P48742 AC010342.1-201ENST00000514047 877 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AC027309.2-201ENST00000520566 192 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.91□□□□□ -1.78
LHX1P48742 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LHX1P48742 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.91□□□□□ -1.78
LHX1P48742 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.91□□□□□ -1.78
LHX1P48742 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.91□□□□□ -1.78
LHX1P48742 DEFB109D-201ENST00000529497 240 ntBASIC3.91□□□□□ -1.78
LHX1P48742 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
LHX1P48742 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.91□□□□□ -1.78
LHX1P48742 GTF2IP22-201ENST00000554443 182 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AC138915.2-201ENST00000569776 97 ntBASIC3.91□□□□□ -1.78
LHX1P48742 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 AC008739.3-201ENST00000603262 127 ntBASIC3.91□□□□□ -1.78
LHX1P48742 LLPHP1-201ENST00000603571 367 ntBASIC3.91□□□□□ -1.78
LHX1P48742 BRDTP1-201ENST00000605735 677 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.91□□□□□ -1.78
LHX1P48742 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 AC004825.2-201ENST00000616634 455 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AC112200.1-201ENST00000625015 234 ntBASIC3.91□□□□□ -1.78
LHX1P48742 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.91□□□□□ -1.78
LHX1P48742 MKKS-204ENST00000639674 192 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AC009452.1-201ENST00000640823 606 ntBASIC3.91□□□□□ -1.78
LHX1P48742 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LHX1P48742 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
LHX1P48742 AL031985.3-201ENST00000565390 2449 ntBASIC3.91□□□□□ -1.78
LHX1P48742 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LHX1P48742 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LHX1P48742 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.9□□□□□ -1.78
LHX1P48742 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.9□□□□□ -1.78
LHX1P48742 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.9□□□□□ -1.78
LHX1P48742 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LHX1P48742 AP000568.1-201ENST00000282964 442 ntBASIC3.9□□□□□ -1.79
LHX1P48742 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LHX1P48742 RNU5D-1-201ENST00000363299 116 ntBASIC3.9□□□□□ -1.79
LHX1P48742 RNU6-1242P-201ENST00000391052 103 ntBASIC3.9□□□□□ -1.79
LHX1P48742 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.9□□□□□ -1.79
LHX1P48742 RPL31P2-201ENST00000413849 377 ntBASIC3.9□□□□□ -1.79
LHX1P48742 KRR1P1-201ENST00000419430 803 ntBASIC3.9□□□□□ -1.79
LHX1P48742 MTND2P16-201ENST00000419987 799 ntBASIC3.9□□□□□ -1.79
LHX1P48742 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LHX1P48742 RPL31P54-201ENST00000429803 370 ntBASIC3.9□□□□□ -1.79
LHX1P48742 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.9□□□□□ -1.79
LHX1P48742 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.9□□□□□ -1.79
LHX1P48742 AC084290.1-201ENST00000434995 374 ntBASIC3.9□□□□□ -1.79
LHX1P48742 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LHX1P48742 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.9□□□□□ -1.79
LHX1P48742 MTCO3P2-201ENST00000457365 171 ntBASIC3.9□□□□□ -1.79
LHX1P48742 AC013828.1-201ENST00000481845 158 ntBASIC3.9□□□□□ -1.79
LHX1P48742 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.9□□□□□ -1.79
LHX1P48742 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.9□□□□□ -1.79
LHX1P48742 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LHX1P48742 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LHX1P48742 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LHX1P48742 MTCO1P30-201ENST00000515244 580 ntBASIC3.9□□□□□ -1.79
LHX1P48742 RNU6-1225P-201ENST00000516336 65 ntBASIC3.9□□□□□ -1.79
LHX1P48742 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.9□□□□□ -1.79
LHX1P48742 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.9□□□□□ -1.79
LHX1P48742 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.9□□□□□ -1.79
LHX1P48742 OR8L1P-201ENST00000534005 955 ntBASIC3.9□□□□□ -1.79
LHX1P48742 AC008011.1-201ENST00000545989 227 ntBASIC3.9□□□□□ -1.79
LHX1P48742 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.9□□□□□ -1.79
LHX1P48742 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.9□□□□□ -1.79
LHX1P48742 AC010591.1-201ENST00000603941 649 ntBASIC3.9□□□□□ -1.79
LHX1P48742 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.9□□□□□ -1.79
LHX1P48742 AL355816.2-201ENST00000610049 647 ntBASIC3.9□□□□□ -1.79
LHX1P48742 AC005332.6-201ENST00000613178 446 ntBASIC3.9□□□□□ -1.79
LHX1P48742 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.9□□□□□ -1.79
LHX1P48742 AC006386.1-201ENST00000619436 415 ntBASIC3.9□□□□□ -1.79
LHX1P48742 AC013470.4-201ENST00000619978 986 ntBASIC3.9□□□□□ -1.79
LHX1P48742 MIR6075-201ENST00000620782 95 ntBASIC3.9□□□□□ -1.79
LHX1P48742 AC067852.7-201ENST00000623270 535 ntBASIC3.9□□□□□ -1.79
LHX1P48742 AC009093.8-201ENST00000641769 292 ntBASIC3.9□□□□□ -1.79
LHX1P48742 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
LHX1P48742 AC109315.1-201ENST00000584143 1347 ntBASIC3.9□□□□□ -1.79
LHX1P48742 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LHX1P48742 AC106871.1-201ENST00000568324 3102 ntBASIC3.9□□□□□ -1.79
LHX1P48742 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LHX1P48742 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LHX1P48742 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
LHX1P48742 AL133412.1-201ENST00000380194 2992 ntBASIC3.89□□□□□ -1.79
LHX1P48742 SNORD116.1-201ENST00000365628 92 ntBASIC3.89□□□□□ -1.79
LHX1P48742 MIR670-201ENST00000390142 98 ntBASIC3.89□□□□□ -1.79
LHX1P48742 AL023807.1-201ENST00000407932 359 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms