Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.05□□□□□ -1.76
SOX2P48431 RN7SL176P-201ENST00000580352 264 ntBASIC4.05□□□□□ -1.76
SOX2P48431 MIR3682-201ENST00000581338 84 ntBASIC4.05□□□□□ -1.76
SOX2P48431 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.05□□□□□ -1.76
SOX2P48431 AL353997.4-201ENST00000586196 166 ntBASIC4.05□□□□□ -1.76
SOX2P48431 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 AC006116.3-201ENST00000592968 361 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AC113194.1-201ENST00000606037 500 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AC024941.1-201ENST00000612250 334 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AC138649.3-201ENST00000622154 254 ntBASIC4.05□□□□□ -1.76
SOX2P48431 AP006248.2-201ENST00000623309 592 ntBASIC4.05□□□□□ -1.76
SOX2P48431 CR381572.2-201ENST00000624852 397 ntBASIC4.05□□□□□ -1.76
SOX2P48431 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SOX2P48431 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOX2P48431 A2MP1-204ENST00000566278 4130 ntBASIC4.05□□□□□ -1.76
SOX2P48431 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOX2P48431 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SOX2P48431 AL592182.3-201ENST00000642132 3304 ntBASIC4.05□□□□□ -1.76
SOX2P48431 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.05□□□□□ -1.76
SOX2P48431 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.04□□□□□ -1.76
SOX2P48431 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.04□□□□□ -1.76
SOX2P48431 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.04□□□□□ -1.76
SOX2P48431 AL391684.1-202ENST00000641293 1636 ntBASIC4.04□□□□□ -1.76
SOX2P48431 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 RNU6-853P-201ENST00000364306 107 ntBASIC4.04□□□□□ -1.76
SOX2P48431 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX2P48431 RNU1-106P-201ENST00000384382 164 ntBASIC4.04□□□□□ -1.76
SOX2P48431 ENSAP1-201ENST00000392855 326 ntBASIC4.04□□□□□ -1.76
SOX2P48431 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 AL078595.1-201ENST00000404458 226 ntBASIC4.04□□□□□ -1.76
SOX2P48431 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AL591848.1-201ENST00000413092 322 ntBASIC4.04□□□□□ -1.76
SOX2P48431 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 AL592293.2-201ENST00000422292 996 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AC007742.1-201ENST00000425789 329 ntBASIC4.04□□□□□ -1.76
SOX2P48431 RPL21P91-201ENST00000429231 479 ntBASIC4.04□□□□□ -1.76
SOX2P48431 OR2B7P-201ENST00000429302 934 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AL590233.1-201ENST00000430017 456 ntBASIC4.04□□□□□ -1.76
SOX2P48431 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 MTND3P21-201ENST00000433774 331 ntBASIC4.04□□□□□ -1.76
SOX2P48431 ELOCP26-201ENST00000436067 329 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.04□□□□□ -1.76
SOX2P48431 CNOT7P2-201ENST00000441051 832 ntBASIC4.04□□□□□ -1.76
SOX2P48431 FAM103A2P-201ENST00000444122 354 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX2P48431 AC112498.1-201ENST00000444401 332 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX2P48431 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX2P48431 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX2P48431 RPS3AP17-201ENST00000472594 777 ntBASIC4.04□□□□□ -1.76
SOX2P48431 RPL23AP65-201ENST00000475608 468 ntBASIC4.04□□□□□ -1.76
SOX2P48431 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.04□□□□□ -1.76
SOX2P48431 HMGB1P21-201ENST00000502313 581 ntBASIC4.04□□□□□ -1.76
SOX2P48431 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SOX2P48431 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.04□□□□□ -1.76
SOX2P48431 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.04□□□□□ -1.76
SOX2P48431 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.04□□□□□ -1.76
SOX2P48431 AC022483.1-201ENST00000514020 567 ntBASIC4.04□□□□□ -1.76
SOX2P48431 ATP5LP3-201ENST00000514223 304 ntBASIC4.04□□□□□ -1.76
SOX2P48431 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX2P48431 RNU6-430P-201ENST00000517078 107 ntBASIC4.04□□□□□ -1.76
SOX2P48431 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SOX2P48431 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX2P48431 MTCO2P4-201ENST00000517968 247 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX2P48431 AC022832.1-201ENST00000530718 645 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.04□□□□□ -1.76
SOX2P48431 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.04□□□□□ -1.76
SOX2P48431 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX2P48431 AC006960.3-201ENST00000561845 705 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.04□□□□□ -1.76
SOX2P48431 VN1R79P-201ENST00000593540 513 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AC025588.3-201ENST00000604182 274 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AL161729.4-201ENST00000604650 476 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AC010857.1-201ENST00000606398 594 ntBASIC4.04□□□□□ -1.76
SOX2P48431 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.04□□□□□ -1.76
SOX2P48431 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.04□□□□□ -1.76
SOX2P48431 AC073534.2-201ENST00000620377 381 ntBASIC4.04□□□□□ -1.76
SOX2P48431 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.04□□□□□ -1.76
SOX2P48431 AC099654.13-201ENST00000639774 207 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AL596275.2-204ENST00000641628 552 ntBASIC4.04□□□□□ -1.76
SOX2P48431 AL596275.2-206ENST00000641957 626 ntBASIC4.04□□□□□ -1.76
SOX2P48431 OR5H6-203ENST00000642105 978 ntBASIC4.04□□□□□ -1.76
SOX2P48431 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.04□□□□□ -1.76
SOX2P48431 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 SAMMSON-226ENST00000642089 1582 ntBASIC4.04□□□□□ -1.76
SOX2P48431 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SOX2P48431 FARSBP1-201ENST00000435808 1778 ntBASIC4.04□□□□□ -1.76
SOX2P48431 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SOX2P48431 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms