Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
USP6P35125 OR56A5-201ENST00000340110 738 ntBASIC3.97□□□□□ -1.77
USP6P35125 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
USP6P35125 RNU6-452P-201ENST00000384406 107 ntBASIC3.97□□□□□ -1.77
USP6P35125 MIR184-201ENST00000384962 84 ntBASIC3.97□□□□□ -1.77
USP6P35125 AC127526.1-201ENST00000417526 366 ntBASIC3.97□□□□□ -1.77
USP6P35125 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.97□□□□□ -1.77
USP6P35125 CLIC4P1-201ENST00000453177 535 ntBASIC3.97□□□□□ -1.77
USP6P35125 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.97□□□□□ -1.77
USP6P35125 AC017037.2-201ENST00000513850 890 ntBASIC3.97□□□□□ -1.77
USP6P35125 AC034159.1-201ENST00000513885 583 ntBASIC3.97□□□□□ -1.77
USP6P35125 AP003049.1-201ENST00000529418 457 ntBASIC3.97□□□□□ -1.77
USP6P35125 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.97□□□□□ -1.77
USP6P35125 AC091544.4-201ENST00000555268 342 ntBASIC3.97□□□□□ -1.77
USP6P35125 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.97□□□□□ -1.77
USP6P35125 AC138761.3-201ENST00000579993 334 ntBASIC3.97□□□□□ -1.77
USP6P35125 AL137072.1-201ENST00000603444 466 ntBASIC3.97□□□□□ -1.77
USP6P35125 AC055764.2-201ENST00000610089 670 ntBASIC3.97□□□□□ -1.77
USP6P35125 AL591516.1-201ENST00000611326 274 ntBASIC3.97□□□□□ -1.77
USP6P35125 PLCE1P1-201ENST00000622094 305 ntBASIC3.97□□□□□ -1.77
USP6P35125 FRG1DP-201ENST00000635586 771 ntBASIC3.97□□□□□ -1.77
USP6P35125 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.97□□□□□ -1.77
USP6P35125 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
USP6P35125 ASNSP1-201ENST00000518311 1939 ntBASIC3.97□□□□□ -1.77
USP6P35125 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP6P35125 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP6P35125 RPS4XP5-202ENST00000449995 1334 ntBASIC3.97□□□□□ -1.77
USP6P35125 AC104446.1-201ENST00000613728 1321 ntBASIC3.97□□□□□ -1.77
USP6P35125 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP6P35125 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP6P35125 AC093311.1-201ENST00000506586 2021 ntBASIC3.97□□□□□ -1.77
USP6P35125 AL512283.1-201ENST00000606756 1384 ntBASIC3.97□□□□□ -1.77
USP6P35125 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
USP6P35125 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.96□□□□□ -1.77
USP6P35125 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
USP6P35125 RNU6-252P-201ENST00000363232 107 ntBASIC3.96□□□□□ -1.77
USP6P35125 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
USP6P35125 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
USP6P35125 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.96□□□□□ -1.77
USP6P35125 RNU4-31P-201ENST00000384211 141 ntBASIC3.96□□□□□ -1.77
USP6P35125 PTGES3P2-201ENST00000407942 482 ntBASIC3.96□□□□□ -1.77
USP6P35125 AL121882.1-201ENST00000422893 417 ntBASIC3.96□□□□□ -1.77
USP6P35125 FO393419.3-201ENST00000428741 282 ntBASIC3.96□□□□□ -1.77
USP6P35125 AC087499.2-201ENST00000432861 149 ntBASIC3.96□□□□□ -1.77
USP6P35125 HMGB1P26-201ENST00000452520 628 ntBASIC3.96□□□□□ -1.77
USP6P35125 RPL23AP23-201ENST00000452590 471 ntBASIC3.96□□□□□ -1.77
USP6P35125 AC126389.1-201ENST00000477436 290 ntBASIC3.96□□□□□ -1.77
USP6P35125 SCGB1D5P-201ENST00000515134 247 ntBASIC3.96□□□□□ -1.77
USP6P35125 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.96□□□□□ -1.77
USP6P35125 AC107016.2-201ENST00000547968 190 ntBASIC3.96□□□□□ -1.77
USP6P35125 AC068714.1-201ENST00000559623 800 ntBASIC3.96□□□□□ -1.77
USP6P35125 AL109741.3-201ENST00000561748 592 ntBASIC3.96□□□□□ -1.77
USP6P35125 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.96□□□□□ -1.77
USP6P35125 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
USP6P35125 MIR5047-201ENST00000579212 100 ntBASIC3.96□□□□□ -1.77
USP6P35125 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.96□□□□□ -1.77
USP6P35125 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.96□□□□□ -1.77
USP6P35125 AL365503.1-201ENST00000605247 905 ntBASIC3.96□□□□□ -1.77
USP6P35125 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.96□□□□□ -1.77
USP6P35125 AP001005.3-201ENST00000622049 129 ntBASIC3.96□□□□□ -1.77
USP6P35125 AP002967.1-201ENST00000624203 539 ntBASIC3.96□□□□□ -1.77
USP6P35125 BX005019.1-201ENST00000561881 1810 ntBASIC3.96□□□□□ -1.78
USP6P35125 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
USP6P35125 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP6P35125 MIR423-201ENST00000362201 94 ntBASIC3.95□□□□□ -1.78
USP6P35125 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP6P35125 SNORA40.4-201ENST00000390971 128 ntBASIC3.95□□□□□ -1.78
USP6P35125 MTCO3P4-201ENST00000419236 787 ntBASIC3.95□□□□□ -1.78
USP6P35125 AC019097.1-201ENST00000424783 735 ntBASIC3.95□□□□□ -1.78
USP6P35125 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP6P35125 TXNP1-201ENST00000441872 371 ntBASIC3.95□□□□□ -1.78
USP6P35125 OR5H3P-201ENST00000502817 919 ntBASIC3.95□□□□□ -1.78
USP6P35125 AC111000.2-201ENST00000507775 550 ntBASIC3.95□□□□□ -1.78
USP6P35125 SNORA76.2-201ENST00000517095 137 ntBASIC3.95□□□□□ -1.78
USP6P35125 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.95□□□□□ -1.78
USP6P35125 CIR1P1-201ENST00000524055 1133 ntBASIC3.95□□□□□ -1.78
USP6P35125 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
USP6P35125 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.95□□□□□ -1.78
USP6P35125 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.95□□□□□ -1.78
USP6P35125 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP6P35125 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.95□□□□□ -1.78
USP6P35125 RPL21P136-201ENST00000605378 396 ntBASIC3.95□□□□□ -1.78
USP6P35125 AP001033.2-201ENST00000609701 1003 ntBASIC3.95□□□□□ -1.78
USP6P35125 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.95□□□□□ -1.78
USP6P35125 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP6P35125 AL049555.1-201ENST00000562834 1933 ntBASIC3.95□□□□□ -1.78
USP6P35125 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP6P35125 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP6P35125 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP6P35125 U3.12-201ENST00000364498 214 ntBASIC3.95□□□□□ -1.78
USP6P35125 MIR142-201ENST00000384835 87 ntBASIC3.95□□□□□ -1.78
USP6P35125 RNU2-17P-201ENST00000410290 190 ntBASIC3.95□□□□□ -1.78
USP6P35125 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.95□□□□□ -1.78
USP6P35125 ELOCP10-201ENST00000440624 327 ntBASIC3.95□□□□□ -1.78
USP6P35125 HMGB3P6-201ENST00000444896 598 ntBASIC3.95□□□□□ -1.78
USP6P35125 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.95□□□□□ -1.78
USP6P35125 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.95□□□□□ -1.78
USP6P35125 YWHAEP4-201ENST00000505390 198 ntBASIC3.95□□□□□ -1.78
USP6P35125 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
USP6P35125 VWA8P1-201ENST00000510889 176 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms