Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL645937.1-201ENST00000641739 1652 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMAP28067 RNU6-252P-201ENST00000363232 107 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 SNORD115-48-201ENST00000364764 76 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMAP28067 RNU1-13P-201ENST00000384499 162 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 MT-TC-201ENST00000387405 66 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 RNA5SP56-201ENST00000410277 118 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 OR1AA1P-201ENST00000419597 916 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 MTATP6P4-201ENST00000427725 675 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 MTND4LP14-201ENST00000429447 288 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 MTCO3P43-201ENST00000440974 771 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC108729.2-201ENST00000476543 840 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC111000.2-201ENST00000507775 550 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC006116.10-201ENST00000591836 581 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC113368.1-201ENST00000603736 382 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC009220.3-201ENST00000604318 586 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC092650.2-201ENST00000619984 902 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC090617.9-201ENST00000623751 147 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 AP003122.6-201ENST00000623831 495 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 MIR6733-201ENST00000635723 61 ntBASIC2.83□□□□□ -1.96
HLA-DMAP28067 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DMAP28067 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMAP28067 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC108206.1-201ENST00000570186 4159 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 RPL23AP57-201ENST00000332361 466 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMAP28067 RNA5SP197-201ENST00000363357 119 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 RNA5SP51-201ENST00000364750 119 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 SNORA14A-201ENST00000364773 135 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 NPM1P10-201ENST00000398310 865 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 RPL21P32-201ENST00000419877 477 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 HSFY1P1-201ENST00000423928 1178 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC073508.1-201ENST00000428866 656 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 RPL39P40-201ENST00000445481 146 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC104472.2-201ENST00000469035 601 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AP004217.1-201ENST00000480579 346 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC004062.1-201ENST00000509926 645 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 SNORA31.26-201ENST00000517250 137 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 IGKV2D-36-201ENST00000518643 226 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC026616.1-201ENST00000523157 525 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 C1DP5-201ENST00000525775 383 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC015917.1-201ENST00000579654 510 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AL669831.4-202ENST00000590817 238 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC008962.1-201ENST00000605729 304 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC107871.2-201ENST00000612894 502 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC002076.2-201ENST00000617362 122 ntBASIC2.82□□□□□ -1.96
HLA-DMAP28067 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMAP28067 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMAP28067 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DMAP28067 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms