Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFRAP16234 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PDGFRAP16234 RNU1-89P-201ENST00000384592 164 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 MT-TC-201ENST00000387405 66 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 HSPE1P26-201ENST00000405341 275 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 HSPE1P8-201ENST00000406997 288 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 RNU6ATAC-201ENST00000408749 126 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PDGFRAP16234 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AC007435.1-201ENST00000421086 415 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.94□□□□□ -1.78
PDGFRAP16234 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.94□□□□□ -1.78
PDGFRAP16234 USP9YP22-201ENST00000438971 294 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 MTCO1P48-201ENST00000448024 1096 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AC006480.1-201ENST00000449887 378 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.94□□□□□ -1.78
PDGFRAP16234 SNORA84-201ENST00000459229 133 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 RPL7P47-201ENST00000497299 556 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 OR5H5P-201ENST00000503164 928 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFRAP16234 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AC113420.1-201ENST00000507903 571 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AC113347.3-201ENST00000509113 148 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 MTCO3P44-201ENST00000510977 541 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 RN7SKP116-201ENST00000516902 319 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 RNA5SP143-201ENST00000516936 115 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AP001189.2-201ENST00000527320 189 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AL389895.1-201ENST00000554127 252 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AC006960.3-201ENST00000561845 705 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AC107954.1-201ENST00000565906 727 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AC091946.2-201ENST00000606105 291 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AC092954.1-201ENST00000609121 445 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 AL121895.2-201ENST00000619558 447 ntBASIC3.94□□□□□ -1.78
PDGFRAP16234 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.94□□□□□ -1.78
PDGFRAP16234 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDGFRAP16234 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.94□□□□□ -1.78
PDGFRAP16234 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PDGFRAP16234 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.93□□□□□ -1.78
PDGFRAP16234 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFRAP16234 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.93□□□□□ -1.78
PDGFRAP16234 AC024560.2-201ENST00000507981 1497 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC027287.1-201ENST00000553115 1453 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 LINC00561-201ENST00000565815 2738 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PDGFRAP16234 RNU6-730P-201ENST00000383954 104 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 SNORA40.2-201ENST00000390847 128 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 RNA5SP424-201ENST00000390988 115 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 EIF5P1-201ENST00000400019 1231 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AL138878.1-201ENST00000405131 347 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 RNA5SP56-201ENST00000410277 118 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 SNORA57.3-201ENST00000411095 141 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDGFRAP16234 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.93□□□□□ -1.78
PDGFRAP16234 AC244098.2-201ENST00000422068 99 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC013410.2-201ENST00000422627 201 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.93□□□□□ -1.78
PDGFRAP16234 AL591419.1-201ENST00000427423 339 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.93□□□□□ -1.78
PDGFRAP16234 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.93□□□□□ -1.78
PDGFRAP16234 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PDGFRAP16234 AC007389.2-201ENST00000434630 306 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 CYCSP43-201ENST00000438233 310 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.93□□□□□ -1.78
PDGFRAP16234 SETD6P1-201ENST00000444575 317 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AL031313.1-201ENST00000448435 256 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 EXOSC3P1-201ENST00000448649 500 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.93□□□□□ -1.78
PDGFRAP16234 snoU13.3-201ENST00000459441 104 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC013828.1-201ENST00000481845 158 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.93□□□□□ -1.78
PDGFRAP16234 UBE2CP3-201ENST00000502715 450 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.93□□□□□ -1.78
PDGFRAP16234 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.93□□□□□ -1.78
PDGFRAP16234 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.93□□□□□ -1.78
PDGFRAP16234 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.93□□□□□ -1.78
PDGFRAP16234 RN7SKP209-201ENST00000516888 304 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.93□□□□□ -1.78
PDGFRAP16234 AC090502.2-201ENST00000549267 280 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.93□□□□□ -1.78
PDGFRAP16234 MIR4509-3-201ENST00000578671 94 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 MIR4509-2-201ENST00000583920 94 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC010928.3-201ENST00000587712 541 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AL355812.1-201ENST00000603215 216 ntBASIC3.93□□□□□ -1.78
PDGFRAP16234 AC025588.3-201ENST00000604182 274 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms