Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC009314.1-201ENST00000603871 304 ntBASIC7.57□□□□□ -1.2
CD44P16070 AL670379.3-201ENST00000605040 251 ntBASIC7.57□□□□□ -1.2
CD44P16070 AC123912.5-201ENST00000605470 343 ntBASIC7.57□□□□□ -1.2
CD44P16070 SNORA16A-202ENST00000628458 135 ntBASIC7.57□□□□□ -1.2
CD44P16070 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC7.57□□□□□ -1.2
CD44P16070 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.57□□□□□ -1.2
CD44P16070 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC7.57□□□□□ -1.2
CD44P16070 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CD44P16070 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CD44P16070 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CD44P16070 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CD44P16070 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7.56□□□□□ -1.2
CD44P16070 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.56□□□□□ -1.2
CD44P16070 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CD44P16070 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CD44P16070 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 FTLP6-201ENST00000355274 422 ntBASIC7.56□□□□□ -1.2
CD44P16070 Y_RNA.35-201ENST00000362601 101 ntBASIC7.56□□□□□ -1.2
CD44P16070 RNA5SP114-201ENST00000363780 113 ntBASIC7.56□□□□□ -1.2
CD44P16070 SNORA70.3-201ENST00000365075 132 ntBASIC7.56□□□□□ -1.2
CD44P16070 SNORD116-21-201ENST00000384507 92 ntBASIC7.56□□□□□ -1.2
CD44P16070 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.56□□□□□ -1.2
CD44P16070 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.56□□□□□ -1.2
CD44P16070 RPS23P10-201ENST00000416185 486 ntBASIC7.56□□□□□ -1.2
CD44P16070 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CD44P16070 EZH2P1-201ENST00000431167 291 ntBASIC7.56□□□□□ -1.2
CD44P16070 RPL3P11-201ENST00000434028 1146 ntBASIC7.56□□□□□ -1.2
CD44P16070 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.56□□□□□ -1.2
CD44P16070 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.56□□□□□ -1.2
CD44P16070 RPL23AP33-201ENST00000442301 452 ntBASIC7.56□□□□□ -1.2
CD44P16070 EEF1B2P3-201ENST00000447718 678 ntBASIC7.56□□□□□ -1.2
CD44P16070 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC7.56□□□□□ -1.2
CD44P16070 RN7SL149P-201ENST00000465197 281 ntBASIC7.56□□□□□ -1.2
CD44P16070 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC7.56□□□□□ -1.2
CD44P16070 CEACAMP3-202ENST00000483806 638 ntBASIC7.56□□□□□ -1.2
CD44P16070 RN7SL187P-201ENST00000495587 303 ntBASIC7.56□□□□□ -1.2
CD44P16070 SNORA40.9-201ENST00000515895 93 ntBASIC7.56□□□□□ -1.2
CD44P16070 RNU6-772P-201ENST00000516042 105 ntBASIC7.56□□□□□ -1.2
CD44P16070 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CD44P16070 AC004232.1-201ENST00000571388 208 ntBASIC7.56□□□□□ -1.2
CD44P16070 AC011193.2-201ENST00000582638 367 ntBASIC7.56□□□□□ -1.2
CD44P16070 AC019257.2-201ENST00000605539 497 ntBASIC7.56□□□□□ -1.2
CD44P16070 AL031777.2-201ENST00000611953 196 ntBASIC7.56□□□□□ -1.2
CD44P16070 AC004852.3-201ENST00000614131 326 ntBASIC7.56□□□□□ -1.2
CD44P16070 AC008626.2-201ENST00000624425 248 ntBASIC7.56□□□□□ -1.2
CD44P16070 AC092079.1-201ENST00000558620 1985 ntBASIC7.56□□□□□ -1.2
CD44P16070 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
CD44P16070 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
CD44P16070 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.56□□□□□ -1.2
CD44P16070 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 AC139769.1-204ENST00000472297 1931 ntBASIC7.56□□□□□ -1.2
CD44P16070 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.56□□□□□ -1.2
CD44P16070 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 CUBNP3-201ENST00000457461 1784 ntBASIC7.56□□□□□ -1.2
CD44P16070 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.56□□□□□ -1.2
CD44P16070 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CD44P16070 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC7.56□□□□□ -1.2
CD44P16070 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CD44P16070 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
CD44P16070 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CD44P16070 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.55□□□□□ -1.2
CD44P16070 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CD44P16070 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CD44P16070 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CD44P16070 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CD44P16070 RNU6-1131P-201ENST00000364955 107 ntBASIC7.55□□□□□ -1.2
CD44P16070 SNORA70G-201ENST00000383923 142 ntBASIC7.55□□□□□ -1.2
CD44P16070 RNU6-318P-201ENST00000384283 103 ntBASIC7.55□□□□□ -1.2
CD44P16070 RNU6-754P-201ENST00000391166 107 ntBASIC7.55□□□□□ -1.2
CD44P16070 AL591034.1-201ENST00000407447 340 ntBASIC7.55□□□□□ -1.2
CD44P16070 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CD44P16070 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.55□□□□□ -1.2
CD44P16070 AC099677.3-201ENST00000427081 395 ntBASIC7.55□□□□□ -1.2
CD44P16070 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.55□□□□□ -1.2
CD44P16070 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.55□□□□□ -1.2
CD44P16070 CRYGGP-201ENST00000443337 145 ntBASIC7.55□□□□□ -1.2
CD44P16070 AL360271.2-201ENST00000447710 161 ntBASIC7.55□□□□□ -1.2
CD44P16070 AL445991.1-201ENST00000450381 475 ntBASIC7.55□□□□□ -1.2
CD44P16070 RPL23AP3-201ENST00000453844 468 ntBASIC7.55□□□□□ -1.2
CD44P16070 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.55□□□□□ -1.2
CD44P16070 DUTP1-201ENST00000493631 470 ntBASIC7.55□□□□□ -1.2
CD44P16070 AC106760.2-201ENST00000504159 619 ntBASIC7.55□□□□□ -1.2
CD44P16070 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC7.55□□□□□ -1.2
CD44P16070 AC107952.1-201ENST00000524200 376 ntBASIC7.55□□□□□ -1.2
CD44P16070 NDUFA3P2-201ENST00000531434 232 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms