Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 HIGD1AP2-201ENST00000446367 280 ntBASIC4.39□□□□□ -1.71
TOP2AP11388 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.39□□□□□ -1.71
TOP2AP11388 OR4A45P-201ENST00000529954 901 ntBASIC4.39□□□□□ -1.71
TOP2AP11388 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.39□□□□□ -1.71
TOP2AP11388 AC025811.1-201ENST00000604312 472 ntBASIC4.39□□□□□ -1.71
TOP2AP11388 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TOP2AP11388 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.39□□□□□ -1.71
TOP2AP11388 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TOP2AP11388 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TOP2AP11388 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TOP2AP11388 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.38□□□□□ -1.71
TOP2AP11388 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.38□□□□□ -1.71
TOP2AP11388 AL662791.1-201ENST00000441992 928 ntBASIC4.38□□□□□ -1.71
TOP2AP11388 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.38□□□□□ -1.71
TOP2AP11388 AC078899.3-201ENST00000599065 212 ntBASIC4.38□□□□□ -1.71
TOP2AP11388 BNIP3P10-201ENST00000605360 577 ntBASIC4.38□□□□□ -1.71
TOP2AP11388 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP2AP11388 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.38□□□□□ -1.71
TOP2AP11388 AC004925.1-201ENST00000624256 2706 ntBASIC4.38□□□□□ -1.71
TOP2AP11388 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TOP2AP11388 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.37□□□□□ -1.71
TOP2AP11388 AL445213.1-201ENST00000412589 747 ntBASIC4.37□□□□□ -1.71
TOP2AP11388 OR2B8P-201ENST00000432841 938 ntBASIC4.37□□□□□ -1.71
TOP2AP11388 AL590103.1-201ENST00000434488 307 ntBASIC4.37□□□□□ -1.71
TOP2AP11388 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.37□□□□□ -1.71
TOP2AP11388 snoU13.23-201ENST00000458863 104 ntBASIC4.37□□□□□ -1.71
TOP2AP11388 AC034244.2-201ENST00000514668 858 ntBASIC4.37□□□□□ -1.71
TOP2AP11388 AC009063.1-201ENST00000563342 702 ntBASIC4.37□□□□□ -1.71
TOP2AP11388 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.37□□□□□ -1.71
TOP2AP11388 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.37□□□□□ -1.71
TOP2AP11388 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TOP2AP11388 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.37□□□□□ -1.71
TOP2AP11388 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.37□□□□□ -1.71
TOP2AP11388 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.37□□□□□ -1.71
TOP2AP11388 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TOP2AP11388 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TOP2AP11388 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.36□□□□□ -1.71
TOP2AP11388 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TOP2AP11388 SNORA31.1-201ENST00000515993 133 ntBASIC4.36□□□□□ -1.71
TOP2AP11388 SNORA31.5-201ENST00000516190 133 ntBASIC4.36□□□□□ -1.71
TOP2AP11388 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.36□□□□□ -1.71
TOP2AP11388 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP2AP11388 AC055876.1-202ENST00000567053 138 ntBASIC4.36□□□□□ -1.71
TOP2AP11388 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP2AP11388 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TOP2AP11388 RPL9P7-201ENST00000330965 580 ntBASIC4.36□□□□□ -1.71
TOP2AP11388 RNU4-26P-201ENST00000410270 107 ntBASIC4.36□□□□□ -1.71
TOP2AP11388 AC002553.2-201ENST00000453217 340 ntBASIC4.36□□□□□ -1.71
TOP2AP11388 AC126182.1-201ENST00000478134 357 ntBASIC4.36□□□□□ -1.71
TOP2AP11388 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.36□□□□□ -1.71
TOP2AP11388 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC4.36□□□□□ -1.71
TOP2AP11388 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.36□□□□□ -1.71
TOP2AP11388 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.36□□□□□ -1.71
TOP2AP11388 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TOP2AP11388 NEAT1-202ENST00000501122 22743 ntBASIC4.35□□□□□ -1.71
TOP2AP11388 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TOP2AP11388 AC134882.1-201ENST00000603738 1676 ntBASIC4.35□□□□□ -1.71
TOP2AP11388 OR51A3P-201ENST00000413596 924 ntBASIC4.35□□□□□ -1.71
TOP2AP11388 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP2AP11388 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP2AP11388 FAM103A2P-201ENST00000444122 354 ntBASIC4.35□□□□□ -1.71
TOP2AP11388 AC008280.2-201ENST00000455473 307 ntBASIC4.35□□□□□ -1.71
TOP2AP11388 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.35□□□□□ -1.71
TOP2AP11388 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TOP2AP11388 CKS1BP1-201ENST00000555221 240 ntBASIC4.35□□□□□ -1.71
TOP2AP11388 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.35□□□□□ -1.71
TOP2AP11388 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TOP2AP11388 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.35□□□□□ -1.71
TOP2AP11388 RNU1-87P-201ENST00000363727 170 ntBASIC4.34□□□□□ -1.71
TOP2AP11388 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TOP2AP11388 MIR1289-2-201ENST00000408360 111 ntBASIC4.34□□□□□ -1.71
TOP2AP11388 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.34□□□□□ -1.71
TOP2AP11388 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.34□□□□□ -1.71
TOP2AP11388 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
TOP2AP11388 EEF1A1P37-201ENST00000522748 715 ntBASIC4.34□□□□□ -1.71
TOP2AP11388 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.34□□□□□ -1.71
TOP2AP11388 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.34□□□□□ -1.71
TOP2AP11388 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TOP2AP11388 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TOP2AP11388 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TOP2AP11388 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TOP2AP11388 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.33□□□□□ -1.72
TOP2AP11388 AC026523.2-201ENST00000625039 7739 ntBASIC4.33□□□□□ -1.72
TOP2AP11388 AL137014.1-201ENST00000420490 1226 ntBASIC4.33□□□□□ -1.72
TOP2AP11388 AL356806.1-201ENST00000422524 916 ntBASIC4.33□□□□□ -1.72
TOP2AP11388 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.33□□□□□ -1.72
TOP2AP11388 HMGN2P3-201ENST00000433603 273 ntBASIC4.33□□□□□ -1.72
TOP2AP11388 HMGN2P5-201ENST00000436882 273 ntBASIC4.33□□□□□ -1.72
TOP2AP11388 RN7SL297P-201ENST00000483161 293 ntBASIC4.33□□□□□ -1.72
TOP2AP11388 AC008716.1-201ENST00000511084 513 ntBASIC4.33□□□□□ -1.72
TOP2AP11388 IGKV2-36-201ENST00000519999 223 ntBASIC4.33□□□□□ -1.72
TOP2AP11388 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.33□□□□□ -1.72
TOP2AP11388 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TOP2AP11388 RAP1BP1-201ENST00000412709 553 ntBASIC4.32□□□□□ -1.72
TOP2AP11388 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.32□□□□□ -1.72
TOP2AP11388 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
TOP2AP11388 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.32□□□□□ -1.72
TOP2AP11388 AC110741.2-201ENST00000605278 268 ntBASIC4.32□□□□□ -1.72
TOP2AP11388 FRG1DP-201ENST00000635586 771 ntBASIC4.32□□□□□ -1.72
TOP2AP11388 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms