Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 Y_RNA.133-201ENST00000363428 110 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 SNORA62-201ENST00000365493 153 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 RPS20P2-201ENST00000402520 389 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 AL024474.1-201ENST00000404655 591 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 RPL35AP12-201ENST00000425362 338 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 RPS27AP6-201ENST00000427962 448 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 KRT8P51-201ENST00000438938 274 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 RPL17P49-201ENST00000443728 411 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 PABPC1P3-201ENST00000469174 459 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 RN7SL319P-201ENST00000480656 221 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 FTH1P24-201ENST00000503502 462 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 AC091912.1-201ENST00000511351 248 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 RNU6-445P-201ENST00000516949 107 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 AC008814.1-201ENST00000603797 406 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 AC005191.1-201ENST00000603950 358 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 AL162431.4-201ENST00000604674 411 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 uc_338.7-201ENST00000621834 124 ntBASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CSB-PGBD3P0DP91 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 GNG5P1-201ENST00000255500 204 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AC079741.1-201ENST00000321498 212 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 RNU6-343P-201ENST00000364709 104 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 RNU6-1318P-201ENST00000365389 103 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 RNU6-744P-201ENST00000365557 107 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 SNORD42.2-201ENST00000365570 69 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 RNU6-1316P-201ENST00000384242 108 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 Y_RNA.579-201ENST00000390939 94 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 RPL7P58-201ENST00000402913 758 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 RNU6-603P-201ENST00000411403 107 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 MTCO3P46-201ENST00000425787 232 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AC092651.1-201ENST00000426110 312 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AL589872.1-201ENST00000426602 288 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AC133104.1-201ENST00000429100 218 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 RPL5P25-201ENST00000441148 775 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AC016691.1-201ENST00000441321 413 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 RNA5SP43-201ENST00000516559 110 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 RNU6-835P-201ENST00000516974 104 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 PHBP17-201ENST00000528576 541 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AC091042.1-201ENST00000579213 173 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AC009248.2-201ENST00000619826 254 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 AC068831.8-201ENST00000620171 435 ntBASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CSB-PGBD3P0DP91 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 MTND4P14-201ENST00000435799 1354 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 MAPK10-263ENST00000641052 4307 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC126755.2-208ENST00000327792 462 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 AC138969.1-213ENST00000331436 462 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 MIR369-201ENST00000362155 70 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 Y_RNA.184-201ENST00000363884 108 ntBASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CSB-PGBD3P0DP91 GLULP6-201ENST00000399502 913 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms