Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC6P09630 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.36□□□□□ -1.71
HOXC6P09630 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
HOXC6P09630 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC6P09630 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HOXC6P09630 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC6P09630 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC6P09630 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXC6P09630 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXC6P09630 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HOXC6P09630 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HOXC6P09630 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HOXC6P09630 Y_RNA.77-201ENST00000362962 107 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 Y_RNA.408-201ENST00000383987 102 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 RNVU1-14-201ENST00000384770 164 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 GSTA8P-201ENST00000404253 637 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 EIF4EP1-201ENST00000422311 642 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AL139421.1-201ENST00000423010 169 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AC019178.2-201ENST00000423595 505 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 GTF2IP7-202ENST00000436677 309 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 HMGB1P37-201ENST00000439613 609 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC6P09630 MTCYBP3-201ENST00000445588 1137 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC6P09630 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC6P09630 HMGB1P16-201ENST00000447155 540 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC6P09630 MTCO2P18-201ENST00000457151 658 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXC6P09630 AC068724.1-201ENST00000487100 792 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC6P09630 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXC6P09630 MTCO3P7-201ENST00000510008 774 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC6P09630 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXC6P09630 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC6P09630 AC124293.1-201ENST00000530034 493 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC6P09630 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC6P09630 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC6P09630 AC008083.2-201ENST00000546707 476 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXC6P09630 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXC6P09630 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC6P09630 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC6P09630 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXC6P09630 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC6P09630 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC6P09630 AC020914.6-201ENST00000594327 272 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AC244505.7-201ENST00000599675 272 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 VN1R82P-201ENST00000601481 356 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AP000811.1-201ENST00000603803 651 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AC064872.1-201ENST00000604823 1072 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 RN7SKP299-201ENST00000606679 301 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AC004492.1-201ENST00000607036 742 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 AL353600.1-201ENST00000608148 251 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC6P09630 AC084035.1-201ENST00000634543 607 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 DCAF13P3-201ENST00000561147 1334 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HOXC6P09630 AL390237.1-201ENST00000404226 1415 ntBASIC4.35□□□□□ -1.71
HOXC6P09630 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
HOXC6P09630 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC6P09630 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC6P09630 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC6P09630 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC6P09630 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
HOXC6P09630 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXC6P09630 PRO1804-201ENST00000623780 2050 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXC6P09630 AC011266.1-201ENST00000624119 3569 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXC6P09630 MIR1303-201ENST00000408625 86 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC6P09630 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC6P09630 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXC6P09630 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC6P09630 IFNNP1-201ENST00000429219 553 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 MTCO1P3-201ENST00000429327 192 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXC6P09630 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXC6P09630 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXC6P09630 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC6P09630 MTND4P6-201ENST00000438297 472 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXC6P09630 RANP8-201ENST00000444720 713 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC6P09630 PPIAP3-201ENST00000450588 505 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC6P09630 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXC6P09630 AC073522.1-201ENST00000483312 377 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXC6P09630 AC026427.2-201ENST00000506228 536 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 AC008494.2-201ENST00000514544 370 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HOXC6P09630 OR4C2P-201ENST00000530855 1064 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 OR5B10P-201ENST00000532869 642 ntBASIC4.34□□□□□ -1.71
HOXC6P09630 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms