Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC107016.2-201ENST00000547968 190 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AL355493.4-201ENST00000618530 292 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 AC048347.1-201ENST00000624621 427 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 SNORA50A-202ENST00000629536 136 ntBASIC2.91□□□□□ -1.94
HLA-DQB2P05538 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DQB2P05538 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HLA-DQB2P05538 ZNF833P-201ENST00000424938 1494 ntBASIC2.9□□□□□ -1.94
HLA-DQB2P05538 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HLA-DQB2P05538 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HLA-DQB2P05538 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 RNU6-851P-201ENST00000384565 107 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 MIR512-1-201ENST00000384913 84 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 SNORA48.2-201ENST00000390926 124 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 UBA52P6-201ENST00000399822 382 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 CYCSP32-201ENST00000440548 321 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 RPL29P29-201ENST00000448725 423 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 AC080014.1-201ENST00000496877 1201 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 CR383656.14-201ENST00000551951 406 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 AL049874.4-201ENST00000557593 255 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 GTF2IP8-201ENST00000560687 584 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 AC017100.2-201ENST00000584628 355 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 BNIP3P22-201ENST00000593399 556 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 AC011468.4-201ENST00000603942 409 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 IGHV3-29-201ENST00000604817 344 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 AP001002.2-201ENST00000625137 386 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQB2P05538 AL645568.2-201ENST00000432815 1337 ntBASIC2.9□□□□□ -1.95
HLA-DQB2P05538 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 SNORA11.1-201ENST00000408133 129 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AC023347.2-201ENST00000433994 462 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 Z85994.2-201ENST00000434327 452 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AC244505.4-201ENST00000434905 287 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 SSXP5-201ENST00000443473 287 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 ARL5AP2-201ENST00000444698 533 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AL627224.1-201ENST00000448334 444 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 RN7SL283P-201ENST00000489055 303 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AC021087.2-201ENST00000504656 1203 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AC016550.3-201ENST00000515706 767 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 RN7SKP234-201ENST00000517173 224 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 IGHV3-76-201ENST00000522465 295 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AC090115.4-201ENST00000609970 188 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 PLCE1P1-201ENST00000622094 305 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AC005183.1-201ENST00000603687 1979 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 AC008264.2-201ENST00000610193 3731 ntBASIC2.89□□□□□ -1.95
HLA-DQB2P05538 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC007256.1-201ENST00000392253 2765 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 RPL9P7-201ENST00000330965 580 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 SNORA18.3-201ENST00000384122 132 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 MTCO1P43-201ENST00000431831 488 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC009969.1-201ENST00000438726 172 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AL592437.1-201ENST00000443781 492 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC011825.1-201ENST00000484967 388 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 ATG10-AS1-201ENST00000504846 648 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC147055.1-201ENST00000509261 750 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 SNORA74D-201ENST00000516404 141 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AC113192.3-201ENST00000529152 742 ntBASIC2.88□□□□□ -1.95
HLA-DQB2P05538 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.88□□□□□ -1.95
HLA-DQB2P05538 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms