Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.23□□□□□ -1.89
APOEP02649 AL136164.4-201ENST00000625013 2135 ntBASIC3.23□□□□□ -1.89
APOEP02649 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.23□□□□□ -1.89
APOEP02649 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOEP02649 SNORA9-201ENST00000384215 133 ntBASIC3.22□□□□□ -1.89
APOEP02649 SNORA46-201ENST00000384762 135 ntBASIC3.22□□□□□ -1.89
APOEP02649 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.22□□□□□ -1.89
APOEP02649 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.22□□□□□ -1.89
APOEP02649 AC241520.1-201ENST00000422654 1099 ntBASIC3.22□□□□□ -1.89
APOEP02649 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.22□□□□□ -1.89
APOEP02649 RPS12P18-201ENST00000442381 270 ntBASIC3.22□□□□□ -1.89
APOEP02649 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.22□□□□□ -1.89
APOEP02649 AL671855.1-201ENST00000446875 1203 ntBASIC3.22□□□□□ -1.89
APOEP02649 AC016696.1-201ENST00000446949 318 ntBASIC3.22□□□□□ -1.89
APOEP02649 RPL5P24-201ENST00000463742 885 ntBASIC3.22□□□□□ -1.89
APOEP02649 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOEP02649 AC021087.2-201ENST00000504656 1203 ntBASIC3.22□□□□□ -1.89
APOEP02649 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.22□□□□□ -1.89
APOEP02649 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.22□□□□□ -1.89
APOEP02649 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.22□□□□□ -1.89
APOEP02649 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.22□□□□□ -1.89
APOEP02649 AC007536.1-201ENST00000533382 349 ntBASIC3.22□□□□□ -1.89
APOEP02649 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.22□□□□□ -1.89
APOEP02649 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.22□□□□□ -1.89
APOEP02649 AL157394.1-201ENST00000562983 1224 ntBASIC3.22□□□□□ -1.89
APOEP02649 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.22□□□□□ -1.89
APOEP02649 AC078899.3-201ENST00000599065 212 ntBASIC3.22□□□□□ -1.89
APOEP02649 AC105227.2-201ENST00000615075 605 ntBASIC3.22□□□□□ -1.89
APOEP02649 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
APOEP02649 AL356490.1-201ENST00000623079 479 ntBASIC3.22□□□□□ -1.89
APOEP02649 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.22□□□□□ -1.89
APOEP02649 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOEP02649 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOEP02649 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
APOEP02649 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOEP02649 MTND5P3-201ENST00000438536 1800 ntBASIC3.21□□□□□ -1.89
APOEP02649 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
APOEP02649 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.21□□□□□ -1.9
APOEP02649 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
APOEP02649 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
APOEP02649 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.21□□□□□ -1.9
APOEP02649 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
APOEP02649 AC110754.1-201ENST00000399740 601 ntBASIC3.21□□□□□ -1.9
APOEP02649 HNRNPDP2-201ENST00000406475 478 ntBASIC3.21□□□□□ -1.9
APOEP02649 AL590103.1-201ENST00000434488 307 ntBASIC3.21□□□□□ -1.9
APOEP02649 AC244505.4-201ENST00000434905 287 ntBASIC3.21□□□□□ -1.9
APOEP02649 SETP8-201ENST00000435341 628 ntBASIC3.21□□□□□ -1.9
APOEP02649 SSXP5-201ENST00000443473 287 ntBASIC3.21□□□□□ -1.9
APOEP02649 AC093392.2-201ENST00000450682 337 ntBASIC3.21□□□□□ -1.9
APOEP02649 AP001992.1-205ENST00000462248 379 ntBASIC3.21□□□□□ -1.9
APOEP02649 RPL27AP5-201ENST00000469428 449 ntBASIC3.21□□□□□ -1.9
APOEP02649 RPL21P18-201ENST00000469899 480 ntBASIC3.21□□□□□ -1.9
APOEP02649 NCOR1P1-202ENST00000486162 291 ntBASIC3.21□□□□□ -1.9
APOEP02649 AP000926.3-201ENST00000497201 299 ntBASIC3.21□□□□□ -1.9
APOEP02649 IGKV2-36-201ENST00000519999 223 ntBASIC3.21□□□□□ -1.9
APOEP02649 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.21□□□□□ -1.9
APOEP02649 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.21□□□□□ -1.9
APOEP02649 SYF2P1-201ENST00000550658 413 ntBASIC3.21□□□□□ -1.9
APOEP02649 AL121594.4-201ENST00000556211 1196 ntBASIC3.21□□□□□ -1.9
APOEP02649 GTF2IP8-201ENST00000560687 584 ntBASIC3.21□□□□□ -1.9
APOEP02649 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.21□□□□□ -1.9
APOEP02649 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.21□□□□□ -1.9
APOEP02649 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.21□□□□□ -1.9
APOEP02649 AC245128.3-201ENST00000594721 748 ntBASIC3.21□□□□□ -1.9
APOEP02649 AC006539.2-201ENST00000601729 572 ntBASIC3.21□□□□□ -1.9
APOEP02649 AC125494.3-201ENST00000602759 455 ntBASIC3.21□□□□□ -1.9
APOEP02649 AL162274.2-201ENST00000614406 332 ntBASIC3.21□□□□□ -1.9
APOEP02649 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.21□□□□□ -1.9
APOEP02649 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOEP02649 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
APOEP02649 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
APOEP02649 AC002546.1-201ENST00000588041 2504 ntBASIC3.21□□□□□ -1.9
APOEP02649 AL353743.1-202ENST00000431724 1695 ntBASIC3.2□□□□□ -1.9
APOEP02649 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
APOEP02649 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.2□□□□□ -1.9
APOEP02649 MIR422A-201ENST00000362286 90 ntBASIC3.2□□□□□ -1.9
APOEP02649 U8.9-201ENST00000365667 134 ntBASIC3.2□□□□□ -1.9
APOEP02649 MIR483-201ENST00000385070 76 ntBASIC3.2□□□□□ -1.9
APOEP02649 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
APOEP02649 MIR887-201ENST00000401258 79 ntBASIC3.2□□□□□ -1.9
APOEP02649 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.2□□□□□ -1.9
APOEP02649 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.2□□□□□ -1.9
APOEP02649 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.2□□□□□ -1.9
APOEP02649 AC245054.2-201ENST00000415639 319 ntBASIC3.2□□□□□ -1.9
APOEP02649 CKS1BP5-201ENST00000434172 273 ntBASIC3.2□□□□□ -1.9
APOEP02649 HMGB1P45-201ENST00000435986 653 ntBASIC3.2□□□□□ -1.9
APOEP02649 UQCRHP3-201ENST00000451503 251 ntBASIC3.2□□□□□ -1.9
APOEP02649 RN7SL75P-201ENST00000461926 281 ntBASIC3.2□□□□□ -1.9
APOEP02649 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
APOEP02649 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
APOEP02649 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.2□□□□□ -1.9
APOEP02649 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
APOEP02649 AC093755.1-201ENST00000512950 1023 ntBASIC3.2□□□□□ -1.9
APOEP02649 SNORA74D-201ENST00000516404 141 ntBASIC3.2□□□□□ -1.9
APOEP02649 RN7SKP244-201ENST00000516513 307 ntBASIC3.2□□□□□ -1.9
APOEP02649 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.2□□□□□ -1.9
APOEP02649 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.2□□□□□ -1.9
APOEP02649 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.2□□□□□ -1.9
APOEP02649 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.2□□□□□ -1.9
APOEP02649 AP002404.1-201ENST00000532005 451 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms