Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.78□□□□□ -1.8
PDGFBP01127 ZNF192P1-203ENST00000565888 810 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.78□□□□□ -1.8
PDGFBP01127 AC012182.1-201ENST00000570133 895 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 MTND6P33-201ENST00000571794 183 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFBP01127 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.78□□□□□ -1.8
PDGFBP01127 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.78□□□□□ -1.8
PDGFBP01127 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFBP01127 AC013468.1-201ENST00000608680 598 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 RNU6-1192P-201ENST00000612197 107 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 RNU6-489P-201ENST00000618289 107 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AC007275.1-201ENST00000621243 671 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AC079684.1-201ENST00000621405 437 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.78□□□□□ -1.8
PDGFBP01127 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFBP01127 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFBP01127 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFBP01127 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PDGFBP01127 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.78□□□□□ -1.8
PDGFBP01127 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
PDGFBP01127 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
PDGFBP01127 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
PDGFBP01127 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
PDGFBP01127 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
PDGFBP01127 GABPAP-201ENST00000419271 1356 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFBP01127 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PDGFBP01127 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFBP01127 RNU4-35P-201ENST00000362588 141 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 RNU6-619P-201ENST00000365146 108 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFBP01127 MIR122-201ENST00000385044 85 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 RNU6-298P-201ENST00000390888 96 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 RPL31P1-201ENST00000398116 372 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 AL031121.1-201ENST00000406553 254 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 MIR1183-201ENST00000408856 89 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.77□□□□□ -1.81
PDGFBP01127 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFBP01127 IFNNP1-201ENST00000429219 553 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 PRELID3BP10-201ENST00000431957 584 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 RPS7P2-201ENST00000435134 607 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.77□□□□□ -1.81
PDGFBP01127 AC005019.1-201ENST00000436455 431 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 RPL7P28-201ENST00000437739 740 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFBP01127 ELOCP13-201ENST00000443934 329 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 SEPT14P24-201ENST00000447236 180 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 AC004022.1-201ENST00000447766 1066 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.77□□□□□ -1.81
PDGFBP01127 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFBP01127 CEACAMP4-201ENST00000457676 421 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 RN7SL271P-201ENST00000487601 295 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 AC020893.1-201ENST00000502452 580 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 TRAV31-201ENST00000502780 342 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 AC008427.1-201ENST00000503102 655 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 AC118282.2-201ENST00000508739 374 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 RNA5SP164-201ENST00000516533 110 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 MTCO1P40-201ENST00000574371 625 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFBP01127 MIR4325-201ENST00000583049 90 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 AL451007.1-201ENST00000595491 289 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 DPRXP5-201ENST00000604662 539 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 HSPE1P14-201ENST00000605812 302 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 AC006023.2-201ENST00000609916 167 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFBP01127 AC139713.2-210ENST00000641741 992 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.77□□□□□ -1.81
PDGFBP01127 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PDGFBP01127 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PDGFBP01127 DBF4P1-201ENST00000412976 1892 ntBASIC3.77□□□□□ -1.81
PDGFBP01127 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFBP01127 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFBP01127 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PDGFBP01127 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFBP01127 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.76□□□□□ -1.81
PDGFBP01127 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFBP01127 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFBP01127 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PDGFBP01127 AC067945.1-201ENST00000342609 618 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 SNORD6-201ENST00000365444 73 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 RNU6-301P-201ENST00000384277 107 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 RNU6-921P-201ENST00000384361 107 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 SNORA3C-201ENST00000408792 125 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 RPS23P10-201ENST00000416185 486 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AC004552.1-201ENST00000419089 348 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 RPF2P1-201ENST00000424137 906 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AC073335.1-201ENST00000427776 363 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.76□□□□□ -1.81
PDGFBP01127 AC091862.1-201ENST00000438016 1100 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 HMGB1P37-201ENST00000439613 609 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.76□□□□□ -1.81
PDGFBP01127 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.76□□□□□ -1.81
PDGFBP01127 RBMY2UP-201ENST00000453474 324 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 NF1P3-201ENST00000457709 450 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 snoU13.3-201ENST00000459441 104 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 RNU7-140P-201ENST00000459546 60 ntBASIC3.76□□□□□ -1.81
PDGFBP01127 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms