Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCD1O75127 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCD1O75127 OR1H1P-201ENST00000448731 937 ntBASIC6.47□□□□□ -1.37
PTCD1O75127 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.47□□□□□ -1.37
PTCD1O75127 TRBV26-201ENST00000456572 344 ntBASIC6.47□□□□□ -1.37
PTCD1O75127 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCD1O75127 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCD1O75127 RNU6-835P-201ENST00000516974 104 ntBASIC6.47□□□□□ -1.37
PTCD1O75127 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCD1O75127 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCD1O75127 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCD1O75127 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCD1O75127 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCD1O75127 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.47□□□□□ -1.37
PTCD1O75127 AC019322.1-201ENST00000571869 389 ntBASIC6.47□□□□□ -1.37
PTCD1O75127 AC090425.1-201ENST00000610007 140 ntBASIC6.47□□□□□ -1.37
PTCD1O75127 DISC2.1-201ENST00000612827 205 ntBASIC6.47□□□□□ -1.37
PTCD1O75127 AC083809.1-201ENST00000615051 472 ntBASIC6.47□□□□□ -1.37
PTCD1O75127 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCD1O75127 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCD1O75127 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCD1O75127 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCD1O75127 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCD1O75127 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PTCD1O75127 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCD1O75127 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.47□□□□□ -1.37
PTCD1O75127 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCD1O75127 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCD1O75127 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTCD1O75127 AC007823.1-201ENST00000569932 1566 ntBASIC6.47□□□□□ -1.37
PTCD1O75127 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.47□□□□□ -1.37
PTCD1O75127 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCD1O75127 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTCD1O75127 MTND5P1-201ENST00000445440 1375 ntBASIC6.46□□□□□ -1.37
PTCD1O75127 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTCD1O75127 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
PTCD1O75127 RPL32P3-201ENST00000359025 275 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 RNU6-1120P-201ENST00000362988 108 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 Y_RNA.157-201ENST00000363638 102 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 RNY1P12-201ENST00000364251 105 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 RNA5SP223-201ENST00000365174 120 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTCD1O75127 SNORA70.10-201ENST00000384515 134 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCD1O75127 AL356432.1-201ENST00000405809 419 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 RNU2-9P-201ENST00000410194 145 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 RNU6-1068P-201ENST00000410958 103 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCD1O75127 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCD1O75127 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCD1O75127 RPL36AP36-201ENST00000418616 301 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCD1O75127 AC007283.2-201ENST00000424739 197 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCD1O75127 AC010733.1-201ENST00000451515 401 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 RN7SL197P-201ENST00000466981 299 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC6.46□□□□□ -1.38
PTCD1O75127 ST13P14-201ENST00000474095 734 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 AC011005.3-201ENST00000491624 395 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 RPS24P16-201ENST00000497294 392 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCD1O75127 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCD1O75127 TRMT10BP1-201ENST00000519377 943 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.46□□□□□ -1.38
PTCD1O75127 AL355834.1-201ENST00000556602 3965 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCD1O75127 VN1R80P-201ENST00000597126 338 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 AC124303.1-201ENST00000605703 360 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 AL391813.2-201ENST00000609113 322 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCD1O75127 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.46□□□□□ -1.38
PTCD1O75127 AC016745.2-201ENST00000608834 3443 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCD1O75127 ZNF652P1-201ENST00000442420 1309 ntBASIC6.46□□□□□ -1.38
PTCD1O75127 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTCD1O75127 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCD1O75127 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCD1O75127 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.45□□□□□ -1.38
PTCD1O75127 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 AL161781.1-201ENST00000354277 403 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 RNU6-223P-201ENST00000362830 107 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
PTCD1O75127 AL356421.1-201ENST00000403255 413 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PTCD1O75127 SETP9-201ENST00000423837 832 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 ATP5JP1-201ENST00000431631 322 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.45□□□□□ -1.38
PTCD1O75127 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.45□□□□□ -1.38
PTCD1O75127 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.45□□□□□ -1.38
PTCD1O75127 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.45□□□□□ -1.38
PTCD1O75127 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.45□□□□□ -1.38
PTCD1O75127 CBWD4P-201ENST00000445695 655 ntBASIC6.45□□□□□ -1.38
PTCD1O75127 AL354710.1-201ENST00000453641 246 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms