Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RN7SL585P-201ENST00000470538 280 ntBASIC3.74□□□□□ -1.81
PRKNO60260 AC006517.1-201ENST00000480485 328 ntBASIC3.74□□□□□ -1.81
PRKNO60260 FTH1P24-201ENST00000503502 462 ntBASIC3.74□□□□□ -1.81
PRKNO60260 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.74□□□□□ -1.81
PRKNO60260 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.74□□□□□ -1.81
PRKNO60260 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.74□□□□□ -1.81
PRKNO60260 STMN1P2-201ENST00000508435 439 ntBASIC3.74□□□□□ -1.81
PRKNO60260 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.74□□□□□ -1.81
PRKNO60260 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.74□□□□□ -1.81
PRKNO60260 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.74□□□□□ -1.81
PRKNO60260 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.74□□□□□ -1.81
PRKNO60260 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.74□□□□□ -1.81
PRKNO60260 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.74□□□□□ -1.81
PRKNO60260 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.74□□□□□ -1.81
PRKNO60260 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.74□□□□□ -1.81
PRKNO60260 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.74□□□□□ -1.81
PRKNO60260 ACTR3BP3-201ENST00000565577 979 ntBASIC3.74□□□□□ -1.81
PRKNO60260 AC074051.3-201ENST00000570238 358 ntBASIC3.74□□□□□ -1.81
PRKNO60260 RN7SL703P-201ENST00000578485 302 ntBASIC3.74□□□□□ -1.81
PRKNO60260 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.74□□□□□ -1.81
PRKNO60260 WISP1-OT1-201ENST00000602893 642 ntBASIC3.74□□□□□ -1.81
PRKNO60260 AP001521.1-201ENST00000609150 300 ntBASIC3.74□□□□□ -1.81
PRKNO60260 AC011939.3-201ENST00000613686 466 ntBASIC3.74□□□□□ -1.81
PRKNO60260 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.74□□□□□ -1.81
PRKNO60260 AC000123.2-201ENST00000623124 461 ntBASIC3.74□□□□□ -1.81
PRKNO60260 AP005264.7-201ENST00000625003 745 ntBASIC3.74□□□□□ -1.81
PRKNO60260 PCMTD1P7-201ENST00000634506 357 ntBASIC3.74□□□□□ -1.81
PRKNO60260 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.74□□□□□ -1.81
PRKNO60260 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
PRKNO60260 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRKNO60260 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.73□□□□□ -1.81
PRKNO60260 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRKNO60260 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRKNO60260 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRKNO60260 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 OR4A15-201ENST00000314706 1035 ntBASIC3.73□□□□□ -1.81
PRKNO60260 SNORA60-201ENST00000362396 134 ntBASIC3.73□□□□□ -1.81
PRKNO60260 RNA5SP52-201ENST00000362448 134 ntBASIC3.73□□□□□ -1.81
PRKNO60260 Y_RNA.77-201ENST00000362962 107 ntBASIC3.73□□□□□ -1.81
PRKNO60260 RNU6-1293P-201ENST00000384077 107 ntBASIC3.73□□□□□ -1.81
PRKNO60260 MT-TH-201ENST00000387441 69 ntBASIC3.73□□□□□ -1.81
PRKNO60260 RPS3AP26-201ENST00000398259 784 ntBASIC3.73□□□□□ -1.81
PRKNO60260 HSPD1P16-201ENST00000402302 394 ntBASIC3.73□□□□□ -1.81
PRKNO60260 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRKNO60260 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PRKNO60260 SNORA11-201ENST00000408789 128 ntBASIC3.73□□□□□ -1.81
PRKNO60260 OR8F1P-201ENST00000425243 930 ntBASIC3.73□□□□□ -1.81
PRKNO60260 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.73□□□□□ -1.81
PRKNO60260 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.73□□□□□ -1.81
PRKNO60260 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.73□□□□□ -1.81
PRKNO60260 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.73□□□□□ -1.81
PRKNO60260 MTCO2P7-201ENST00000446518 666 ntBASIC3.73□□□□□ -1.81
PRKNO60260 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 RPL7P31-201ENST00000450192 724 ntBASIC3.73□□□□□ -1.81
PRKNO60260 AL162388.1-201ENST00000450912 352 ntBASIC3.73□□□□□ -1.81
PRKNO60260 TPTE2P5-203ENST00000458118 728 ntBASIC3.73□□□□□ -1.81
PRKNO60260 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.73□□□□□ -1.81
PRKNO60260 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.73□□□□□ -1.81
PRKNO60260 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.73□□□□□ -1.81
PRKNO60260 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.73□□□□□ -1.81
PRKNO60260 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.73□□□□□ -1.81
PRKNO60260 IFITM8P-201ENST00000522529 394 ntBASIC3.73□□□□□ -1.81
PRKNO60260 ARL2BPP5-201ENST00000523141 481 ntBASIC3.73□□□□□ -1.81
PRKNO60260 AP000790.1-201ENST00000528891 737 ntBASIC3.73□□□□□ -1.81
PRKNO60260 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PRKNO60260 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.73□□□□□ -1.81
PRKNO60260 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 AC023161.2-201ENST00000551218 780 ntBASIC3.73□□□□□ -1.81
PRKNO60260 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.73□□□□□ -1.81
PRKNO60260 AC106785.1-201ENST00000565935 262 ntBASIC3.73□□□□□ -1.81
PRKNO60260 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.73□□□□□ -1.81
PRKNO60260 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.73□□□□□ -1.81
PRKNO60260 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 AP001981.2-201ENST00000603241 418 ntBASIC3.73□□□□□ -1.81
PRKNO60260 AC069304.2-201ENST00000605154 435 ntBASIC3.73□□□□□ -1.81
PRKNO60260 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.73□□□□□ -1.81
PRKNO60260 AC009237.17-201ENST00000618111 748 ntBASIC3.73□□□□□ -1.81
PRKNO60260 RNU6-156P-201ENST00000621869 107 ntBASIC3.73□□□□□ -1.81
PRKNO60260 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 MIR6500-201ENST00000622700 86 ntBASIC3.73□□□□□ -1.81
PRKNO60260 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 MTND5P24-201ENST00000438892 1767 ntBASIC3.73□□□□□ -1.81
PRKNO60260 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRKNO60260 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PRKNO60260 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.73□□□□□ -1.81
PRKNO60260 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.73□□□□□ -1.81
PRKNO60260 ZNF833P-201ENST00000424938 1494 ntBASIC3.73□□□□□ -1.81
PRKNO60260 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms