Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSX4O60224 AC008725.1-201ENST00000605123 2263 ntBASIC3.81□□□□□ -1.8
SSX4O60224 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SSX4O60224 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX4O60224 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SSX4O60224 AP000526.1-201ENST00000603308 1388 ntBASIC3.8□□□□□ -1.8
SSX4O60224 SNORA4.1-201ENST00000364263 144 ntBASIC3.8□□□□□ -1.8
SSX4O60224 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX4O60224 RNU6-339P-201ENST00000384310 107 ntBASIC3.8□□□□□ -1.8
SSX4O60224 RPL31P1-201ENST00000398116 372 ntBASIC3.8□□□□□ -1.8
SSX4O60224 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSX4O60224 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
SSX4O60224 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.8□□□□□ -1.8
SSX4O60224 SNORA74C-2-201ENST00000411179 201 ntBASIC3.8□□□□□ -1.8
SSX4O60224 RAP1BP1-201ENST00000412709 553 ntBASIC3.8□□□□□ -1.8
SSX4O60224 RPL23AP26-201ENST00000412728 464 ntBASIC3.8□□□□□ -1.8
SSX4O60224 TPT1P2-201ENST00000413105 503 ntBASIC3.8□□□□□ -1.8
SSX4O60224 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX4O60224 AC107081.1-201ENST00000414975 361 ntBASIC3.8□□□□□ -1.8
SSX4O60224 MTCYBP38-201ENST00000417160 1123 ntBASIC3.8□□□□□ -1.8
SSX4O60224 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX4O60224 FNDC3CP-201ENST00000420795 1155 ntBASIC3.8□□□□□ -1.8
SSX4O60224 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSX4O60224 RPL23AP38-201ENST00000423801 469 ntBASIC3.8□□□□□ -1.8
SSX4O60224 MTND5P25-201ENST00000430499 799 ntBASIC3.8□□□□□ -1.8
SSX4O60224 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX4O60224 RPL7P28-201ENST00000437739 740 ntBASIC3.8□□□□□ -1.8
SSX4O60224 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSX4O60224 MTND4P6-201ENST00000438297 472 ntBASIC3.8□□□□□ -1.8
SSX4O60224 MTND2P19-201ENST00000449129 1012 ntBASIC3.8□□□□□ -1.8
SSX4O60224 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX4O60224 SNRPGP5-201ENST00000456003 220 ntBASIC3.8□□□□□ -1.8
SSX4O60224 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX4O60224 UQCRHP4-201ENST00000471686 272 ntBASIC3.8□□□□□ -1.8
SSX4O60224 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX4O60224 AC114981.1-201ENST00000503897 678 ntBASIC3.8□□□□□ -1.8
SSX4O60224 AC006499.2-201ENST00000513470 337 ntBASIC3.8□□□□□ -1.8
SSX4O60224 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX4O60224 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.8□□□□□ -1.8
SSX4O60224 UBE2NP1-201ENST00000545592 458 ntBASIC3.8□□□□□ -1.8
SSX4O60224 ELOCP32-201ENST00000548625 324 ntBASIC3.8□□□□□ -1.8
SSX4O60224 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX4O60224 HSPE1P3-201ENST00000559254 309 ntBASIC3.8□□□□□ -1.8
SSX4O60224 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX4O60224 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSX4O60224 MIR4999-201ENST00000585029 91 ntBASIC3.8□□□□□ -1.8
SSX4O60224 RNA5SP108-201ENST00000605921 117 ntBASIC3.8□□□□□ -1.8
SSX4O60224 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX4O60224 AL136981.2-201ENST00000617319 734 ntBASIC3.8□□□□□ -1.8
SSX4O60224 AL445567.2-201ENST00000618935 498 ntBASIC3.8□□□□□ -1.8
SSX4O60224 AL607023.1-201ENST00000620045 248 ntBASIC3.8□□□□□ -1.8
SSX4O60224 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX4O60224 AL161637.1-201ENST00000622380 412 ntBASIC3.8□□□□□ -1.8
SSX4O60224 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSX4O60224 AC004943.3-201ENST00000624116 600 ntBASIC3.8□□□□□ -1.8
SSX4O60224 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.8□□□□□ -1.8
SSX4O60224 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSX4O60224 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.8□□□□□ -1.8
SSX4O60224 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SSX4O60224 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSX4O60224 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSX4O60224 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
SSX4O60224 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX4O60224 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX4O60224 MTND5P3-201ENST00000438536 1800 ntBASIC3.79□□□□□ -1.8
SSX4O60224 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX4O60224 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSX4O60224 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX4O60224 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX4O60224 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX4O60224 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX4O60224 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX4O60224 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX4O60224 Y_RNA.493-201ENST00000384422 102 ntBASIC3.79□□□□□ -1.8
SSX4O60224 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX4O60224 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX4O60224 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX4O60224 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX4O60224 PTP4A1P5-201ENST00000420305 455 ntBASIC3.79□□□□□ -1.8
SSX4O60224 AC011233.1-201ENST00000422812 283 ntBASIC3.79□□□□□ -1.8
SSX4O60224 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX4O60224 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX4O60224 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX4O60224 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX4O60224 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX4O60224 CDC27P1-201ENST00000445384 715 ntBASIC3.79□□□□□ -1.8
SSX4O60224 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX4O60224 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX4O60224 USP9YP34-201ENST00000453983 808 ntBASIC3.79□□□□□ -1.8
SSX4O60224 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX4O60224 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX4O60224 ATG12P2-201ENST00000456830 416 ntBASIC3.79□□□□□ -1.8
SSX4O60224 RPS27AP17-201ENST00000463344 455 ntBASIC3.79□□□□□ -1.8
SSX4O60224 AC097493.1-201ENST00000463958 372 ntBASIC3.79□□□□□ -1.8
SSX4O60224 RPL7P19-201ENST00000469948 618 ntBASIC3.79□□□□□ -1.8
SSX4O60224 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SSX4O60224 AC006517.1-201ENST00000480485 328 ntBASIC3.79□□□□□ -1.8
SSX4O60224 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX4O60224 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX4O60224 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms