Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 IGKV2-26-201ENST00000518305 343 ntBASIC2.95□□□□□ -1.94
SGCEO43556 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.95□□□□□ -1.94
SGCEO43556 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.95□□□□□ -1.94
SGCEO43556 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.95□□□□□ -1.94
SGCEO43556 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.95□□□□□ -1.94
SGCEO43556 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.95□□□□□ -1.94
SGCEO43556 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.95□□□□□ -1.94
SGCEO43556 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.95□□□□□ -1.94
SGCEO43556 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.95□□□□□ -1.94
SGCEO43556 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.95□□□□□ -1.94
SGCEO43556 AC015917.1-201ENST00000579654 510 ntBASIC2.95□□□□□ -1.94
SGCEO43556 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.95□□□□□ -1.94
SGCEO43556 AC103881.1-201ENST00000603476 538 ntBASIC2.95□□□□□ -1.94
SGCEO43556 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.95□□□□□ -1.94
SGCEO43556 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.95□□□□□ -1.94
SGCEO43556 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.95□□□□□ -1.94
SGCEO43556 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.95□□□□□ -1.94
SGCEO43556 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
SGCEO43556 ZNF90P1-201ENST00000480493 1951 ntBASIC2.94□□□□□ -1.94
SGCEO43556 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.94□□□□□ -1.94
SGCEO43556 CR383658.2-201ENST00000547576 1525 ntBASIC2.94□□□□□ -1.94
SGCEO43556 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.94□□□□□ -1.94
SGCEO43556 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SGCEO43556 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SGCEO43556 RNA5SP50-201ENST00000363731 107 ntBASIC2.94□□□□□ -1.94
SGCEO43556 U8.9-201ENST00000365667 134 ntBASIC2.94□□□□□ -1.94
SGCEO43556 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
SGCEO43556 MT-TC-201ENST00000387405 66 ntBASIC2.94□□□□□ -1.94
SGCEO43556 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SGCEO43556 SAR1AP2-201ENST00000392696 594 ntBASIC2.94□□□□□ -1.94
SGCEO43556 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.94□□□□□ -1.94
SGCEO43556 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.94□□□□□ -1.94
SGCEO43556 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.94□□□□□ -1.94
SGCEO43556 HMGN2P31-201ENST00000432430 273 ntBASIC2.94□□□□□ -1.94
SGCEO43556 YWHAZP8-201ENST00000436935 731 ntBASIC2.94□□□□□ -1.94
SGCEO43556 RPL17P49-201ENST00000443728 411 ntBASIC2.94□□□□□ -1.94
SGCEO43556 CDC27P1-201ENST00000445384 715 ntBASIC2.94□□□□□ -1.94
SGCEO43556 AC091564.1-201ENST00000464563 479 ntBASIC2.94□□□□□ -1.94
SGCEO43556 AC010285.1-201ENST00000470580 392 ntBASIC2.94□□□□□ -1.94
SGCEO43556 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.94□□□□□ -1.94
SGCEO43556 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.94□□□□□ -1.94
SGCEO43556 AC245166.1-201ENST00000521012 253 ntBASIC2.94□□□□□ -1.94
SGCEO43556 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.94□□□□□ -1.94
SGCEO43556 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.94□□□□□ -1.94
SGCEO43556 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.94□□□□□ -1.94
SGCEO43556 AC007536.1-201ENST00000533382 349 ntBASIC2.94□□□□□ -1.94
SGCEO43556 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.94□□□□□ -1.94
SGCEO43556 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.94□□□□□ -1.94
SGCEO43556 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.94□□□□□ -1.94
SGCEO43556 MIR5186-201ENST00000577504 120 ntBASIC2.94□□□□□ -1.94
SGCEO43556 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.94□□□□□ -1.94
SGCEO43556 MIR3922-201ENST00000585192 84 ntBASIC2.94□□□□□ -1.94
SGCEO43556 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.94□□□□□ -1.94
SGCEO43556 AC125494.3-201ENST00000602759 455 ntBASIC2.94□□□□□ -1.94
SGCEO43556 AL133393.1-201ENST00000603277 287 ntBASIC2.94□□□□□ -1.94
SGCEO43556 AC092354.2-201ENST00000607786 514 ntBASIC2.94□□□□□ -1.94
SGCEO43556 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.94□□□□□ -1.94
SGCEO43556 AL356321.1-201ENST00000621360 228 ntBASIC2.94□□□□□ -1.94
SGCEO43556 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SGCEO43556 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.94□□□□□ -1.94
SGCEO43556 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SGCEO43556 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SGCEO43556 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.93□□□□□ -1.94
SGCEO43556 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SGCEO43556 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.93□□□□□ -1.94
SGCEO43556 AC234772.1-201ENST00000377927 937 ntBASIC2.93□□□□□ -1.94
SGCEO43556 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SGCEO43556 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
SGCEO43556 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.93□□□□□ -1.94
SGCEO43556 AC092745.2-202ENST00000411880 369 ntBASIC2.93□□□□□ -1.94
SGCEO43556 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SGCEO43556 AC093578.1-201ENST00000415219 368 ntBASIC2.93□□□□□ -1.94
SGCEO43556 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SGCEO43556 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.93□□□□□ -1.94
SGCEO43556 OFD1P18Y-201ENST00000420889 959 ntBASIC2.93□□□□□ -1.94
SGCEO43556 AC012065.2-201ENST00000421295 375 ntBASIC2.93□□□□□ -1.94
SGCEO43556 HSFY1P1-201ENST00000423928 1178 ntBASIC2.93□□□□□ -1.94
SGCEO43556 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.93□□□□□ -1.94
SGCEO43556 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.93□□□□□ -1.94
SGCEO43556 PDSS1P2-201ENST00000449397 678 ntBASIC2.93□□□□□ -1.94
SGCEO43556 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.93□□□□□ -1.94
SGCEO43556 HMGN2P13-201ENST00000476476 274 ntBASIC2.93□□□□□ -1.94
SGCEO43556 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SGCEO43556 IGKV2D-36-201ENST00000518643 226 ntBASIC2.93□□□□□ -1.94
SGCEO43556 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.93□□□□□ -1.94
SGCEO43556 AP003385.6-201ENST00000531603 374 ntBASIC2.93□□□□□ -1.94
SGCEO43556 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.93□□□□□ -1.94
SGCEO43556 CR383656.14-201ENST00000551951 406 ntBASIC2.93□□□□□ -1.94
SGCEO43556 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.93□□□□□ -1.94
SGCEO43556 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.93□□□□□ -1.94
SGCEO43556 AL157394.1-201ENST00000562983 1224 ntBASIC2.93□□□□□ -1.94
SGCEO43556 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.93□□□□□ -1.94
SGCEO43556 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.93□□□□□ -1.94
SGCEO43556 AC017100.2-201ENST00000584628 355 ntBASIC2.93□□□□□ -1.94
SGCEO43556 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.93□□□□□ -1.94
SGCEO43556 AC078899.3-201ENST00000599065 212 ntBASIC2.93□□□□□ -1.94
SGCEO43556 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.93□□□□□ -1.94
SGCEO43556 STMN1P1-201ENST00000617809 440 ntBASIC2.93□□□□□ -1.94
SGCEO43556 SNORD39.4-201ENST00000620099 78 ntBASIC2.93□□□□□ -1.94
SGCEO43556 AL590240.3-201ENST00000621416 943 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms