Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC079776.3-201ENST00000450665 370 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.24□□□□□ -1.73
SMAD6O43541 RNA5SP246-201ENST00000458909 119 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC012170.1-201ENST00000495139 359 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 BNIP3P41-201ENST00000503774 571 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC093824.1-201ENST00000508796 343 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC079395.1-201ENST00000510981 262 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 FABP5P5-201ENST00000515537 406 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 RNU6-405P-201ENST00000516637 110 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AC008694.2-201ENST00000517591 306 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 IGHV3-32-201ENST00000519182 355 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 IGLV3-26-201ENST00000520756 302 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC124068.1-201ENST00000563131 678 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AP005205.1-201ENST00000563503 508 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.24□□□□□ -1.73
SMAD6O43541 MIR3160-1-201ENST00000577972 85 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.24□□□□□ -1.73
SMAD6O43541 VN1R79P-201ENST00000593540 513 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AL606834.2-201ENST00000602954 668 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AC013476.2-201ENST00000614456 459 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 SNX18P1Y-201ENST00000616231 511 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AC099669.2-201ENST00000616549 437 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 AC023509.5-201ENST00000617434 807 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.24□□□□□ -1.73
SMAD6O43541 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.24□□□□□ -1.73
SMAD6O43541 AC127502.3-201ENST00000636170 1206 ntBASIC4.24□□□□□ -1.73
SMAD6O43541 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SMAD6O43541 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SMAD6O43541 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMAD6O43541 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.24□□□□□ -1.73
SMAD6O43541 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.24□□□□□ -1.73
SMAD6O43541 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.24□□□□□ -1.73
SMAD6O43541 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.24□□□□□ -1.73
SMAD6O43541 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMAD6O43541 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SMAD6O43541 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SMAD6O43541 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 AC073544.1-201ENST00000600110 1595 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 SEC63P2-201ENST00000503863 1939 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 AC008725.1-201ENST00000605123 2263 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 ENSAP3-201ENST00000312710 333 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 MIR372-201ENST00000362225 67 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 Y_RNA.248-201ENST00000364501 109 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 SNORA75-201ENST00000384158 137 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 RNU6-253P-201ENST00000384730 105 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 RNU11-4P-201ENST00000391149 133 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMAD6O43541 VTA1P1-201ENST00000414044 866 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AC007435.1-201ENST00000421086 415 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.23□□□□□ -1.73
SMAD6O43541 AC104651.1-201ENST00000427559 735 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AL596276.1-201ENST00000434465 418 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.23□□□□□ -1.73
SMAD6O43541 AL031663.1-201ENST00000437445 219 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AL353093.1-201ENST00000441292 436 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 TRIM60P18-201ENST00000441518 828 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.23□□□□□ -1.73
SMAD6O43541 AL672167.3-201ENST00000465951 960 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.23□□□□□ -1.73
SMAD6O43541 AC096751.1-202ENST00000502691 1067 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.23□□□□□ -1.73
SMAD6O43541 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SMAD6O43541 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.23□□□□□ -1.73
SMAD6O43541 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.23□□□□□ -1.73
SMAD6O43541 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.23□□□□□ -1.73
SMAD6O43541 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.23□□□□□ -1.73
SMAD6O43541 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.23□□□□□ -1.73
SMAD6O43541 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.23□□□□□ -1.73
SMAD6O43541 AP001180.3-201ENST00000582221 145 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AC008507.1-201ENST00000587506 734 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AC005255.1-201ENST00000593748 216 ntBASIC4.23□□□□□ -1.73
SMAD6O43541 AL592221.1-201ENST00000605266 382 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms