Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AP000580.1-201ENST00000404439 358 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.55□□□□□ -1.68
PROM1O43490 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 RWDD4P2-201ENST00000426392 563 ntBASIC4.55□□□□□ -1.68
PROM1O43490 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PROM1O43490 RPL37P1-201ENST00000432310 284 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.55□□□□□ -1.68
PROM1O43490 SNRPEP7-201ENST00000438350 220 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.55□□□□□ -1.68
PROM1O43490 AC108751.2-201ENST00000469993 231 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AC010301.1-201ENST00000473936 355 ntBASIC4.55□□□□□ -1.68
PROM1O43490 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.55□□□□□ -1.68
PROM1O43490 AC106872.3-201ENST00000495104 446 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.55□□□□□ -1.68
PROM1O43490 AC006499.2-201ENST00000513470 337 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.55□□□□□ -1.68
PROM1O43490 AC134698.5-201ENST00000519444 336 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 DEFB109D-201ENST00000529497 240 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.55□□□□□ -1.68
PROM1O43490 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.55□□□□□ -1.68
PROM1O43490 AC087477.6-201ENST00000559595 843 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AC022726.1-201ENST00000587475 207 ntBASIC4.55□□□□□ -1.68
PROM1O43490 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 AC022916.3-201ENST00000592961 742 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AC112191.3-201ENST00000604371 277 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AL161616.1-201ENST00000611867 286 ntBASIC4.55□□□□□ -1.68
PROM1O43490 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 SAMMSON-226ENST00000642089 1582 ntBASIC4.55□□□□□ -1.68
PROM1O43490 DHX9P1-201ENST00000436565 3076 ntBASIC4.55□□□□□ -1.68
PROM1O43490 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PROM1O43490 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.55□□□□□ -1.68
PROM1O43490 AP002001.2-201ENST00000529025 1469 ntBASIC4.55□□□□□ -1.68
PROM1O43490 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PROM1O43490 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PROM1O43490 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
PROM1O43490 AC139713.2-215ENST00000641428 5037 ntBASIC4.54□□□□□ -1.68
PROM1O43490 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
PROM1O43490 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.54□□□□□ -1.68
PROM1O43490 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
PROM1O43490 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PROM1O43490 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PROM1O43490 OR4A15-201ENST00000314706 1035 ntBASIC4.54□□□□□ -1.68
PROM1O43490 RNU6-777P-201ENST00000364265 104 ntBASIC4.54□□□□□ -1.68
PROM1O43490 Y_RNA.256-201ENST00000364594 104 ntBASIC4.54□□□□□ -1.68
PROM1O43490 Y_RNA.303-201ENST00000364998 94 ntBASIC4.54□□□□□ -1.68
PROM1O43490 SNORA62-201ENST00000365493 153 ntBASIC4.54□□□□□ -1.68
PROM1O43490 RNU6-1279P-201ENST00000383917 103 ntBASIC4.54□□□□□ -1.68
PROM1O43490 U3.35-201ENST00000408405 208 ntBASIC4.54□□□□□ -1.68
PROM1O43490 RPS3AP3-201ENST00000411933 242 ntBASIC4.54□□□□□ -1.68
PROM1O43490 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PROM1O43490 C1DP2-201ENST00000418167 426 ntBASIC4.54□□□□□ -1.68
PROM1O43490 E2F6P2-201ENST00000420708 748 ntBASIC4.54□□□□□ -1.68
PROM1O43490 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PROM1O43490 SDCBPP2-201ENST00000424643 885 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.54□□□□□ -1.68
PROM1O43490 SKP1P1-201ENST00000438081 489 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AC004938.1-201ENST00000438468 308 ntBASIC4.54□□□□□ -1.68
PROM1O43490 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PROM1O43490 AL662791.1-201ENST00000441992 928 ntBASIC4.54□□□□□ -1.68
PROM1O43490 RPL7P36-201ENST00000444633 681 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AL671855.1-201ENST00000446875 1203 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.54□□□□□ -1.68
PROM1O43490 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.54□□□□□ -1.68
PROM1O43490 AC009963.2-201ENST00000453431 138 ntBASIC4.54□□□□□ -1.68
PROM1O43490 HMGN3P1-201ENST00000453847 193 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.54□□□□□ -1.68
PROM1O43490 AC146507.1-201ENST00000468335 354 ntBASIC4.54□□□□□ -1.68
PROM1O43490 RN7SL385P-201ENST00000468873 276 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.54□□□□□ -1.68
PROM1O43490 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.54□□□□□ -1.68
PROM1O43490 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
PROM1O43490 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.54□□□□□ -1.68
PROM1O43490 AC021146.3-201ENST00000511911 260 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AC108064.1-201ENST00000513791 460 ntBASIC4.54□□□□□ -1.68
PROM1O43490 RNU6-430P-201ENST00000517078 107 ntBASIC4.54□□□□□ -1.68
PROM1O43490 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PROM1O43490 AC022878.1-201ENST00000530684 149 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AC118273.2-201ENST00000532092 465 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.54□□□□□ -1.68
PROM1O43490 AL121579.1-201ENST00000555129 305 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.54□□□□□ -1.68
PROM1O43490 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.54□□□□□ -1.68
PROM1O43490 AC093249.4-201ENST00000564755 259 ntBASIC4.54□□□□□ -1.68
PROM1O43490 UBE2FP2-201ENST00000566646 462 ntBASIC4.54□□□□□ -1.68
PROM1O43490 MIR5186-201ENST00000577504 120 ntBASIC4.54□□□□□ -1.68
PROM1O43490 RN7SL802P-201ENST00000577858 299 ntBASIC4.54□□□□□ -1.68
PROM1O43490 MIR4458-201ENST00000578872 75 ntBASIC4.54□□□□□ -1.68
PROM1O43490 MIR5699-201ENST00000578903 90 ntBASIC4.54□□□□□ -1.68
PROM1O43490 SNORD39.3-201ENST00000584451 71 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.54□□□□□ -1.68
PROM1O43490 AC067852.4-201ENST00000590314 478 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AL161729.4-201ENST00000604650 476 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AL359314.1-201ENST00000616913 261 ntBASIC4.54□□□□□ -1.68
PROM1O43490 AC124864.2-201ENST00000624736 186 ntBASIC4.54□□□□□ -1.68
PROM1O43490 MIR6715B-201ENST00000637172 77 ntBASIC4.54□□□□□ -1.68
PROM1O43490 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms