Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF113AO15541 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF113AO15541 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
RNF113AO15541 RNU6-805P-201ENST00000365643 106 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 RPL17P50-201ENST00000396131 546 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF113AO15541 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF113AO15541 VDAC1P3-201ENST00000434069 851 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 B3GNT2P1-201ENST00000434960 952 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF113AO15541 AC125238.1-201ENST00000448842 249 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 RPL27AP5-201ENST00000469428 449 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RNF113AO15541 RNA5SP341-201ENST00000516261 117 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 RN7SKP289-201ENST00000517244 295 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 MTCYBP41-201ENST00000528913 1123 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF113AO15541 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF113AO15541 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF113AO15541 MIR4325-201ENST00000583049 90 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF113AO15541 HMGN2P28-201ENST00000606102 262 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 AC099778.2-201ENST00000610904 211 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 AP004607.9-201ENST00000618202 316 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 AC139713.2-210ENST00000641741 992 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF113AO15541 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF113AO15541 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF113AO15541 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF113AO15541 AC004972.1-201ENST00000623934 2209 ntBASIC3.66□□□□□ -1.82
RNF113AO15541 AL136164.4-201ENST00000625013 2135 ntBASIC3.65□□□□□ -1.82
RNF113AO15541 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RNF113AO15541 XPOTP1-201ENST00000443317 2398 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 RNU6-670P-201ENST00000364312 104 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 SNORA71.1-201ENST00000364523 117 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 RNU6-335P-201ENST00000364563 113 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 AL353692.2-201ENST00000407054 335 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 RNA5SP293-201ENST00000410527 113 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 AIMP1P1-201ENST00000418670 937 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 AC244098.2-201ENST00000422068 99 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 RPL21P66-201ENST00000426566 466 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF113AO15541 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF113AO15541 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.65□□□□□ -1.83
RNF113AO15541 AC092754.2-201ENST00000463506 460 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF113AO15541 RPL23AP55-201ENST00000498163 452 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 TMEM248P1-201ENST00000510579 951 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 RN7SKP244-201ENST00000516513 307 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.65□□□□□ -1.83
RNF113AO15541 AC025260.1-201ENST00000548858 430 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 AL389895.1-201ENST00000554127 252 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 AC007318.2-201ENST00000620999 243 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 AP001002.2-201ENST00000625137 386 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
RNF113AO15541 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF113AO15541 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF113AO15541 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RNF113AO15541 AL672296.1-201ENST00000427780 2158 ntBASIC3.65□□□□□ -1.83
RNF113AO15541 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF113AO15541 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF113AO15541 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF113AO15541 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF113AO15541 RNU6-1181P-201ENST00000384191 106 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 BTBD10P2-201ENST00000404779 676 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 HMGB3P23-201ENST00000414981 585 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF113AO15541 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF113AO15541 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF113AO15541 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF113AO15541 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF113AO15541 HMGB1P5-202ENST00000451497 985 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF113AO15541 HMGN2P16-201ENST00000456802 261 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF113AO15541 AC117440.1-201ENST00000474107 571 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 AC012181.1-201ENST00000479895 423 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 HMGB1P47-201ENST00000511281 589 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 MTCO2P32-201ENST00000514865 403 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 AC009812.2-201ENST00000517657 457 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF113AO15541 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF113AO15541 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.64□□□□□ -1.83
RNF113AO15541 MIR4474-201ENST00000579189 78 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF113AO15541 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF113AO15541 AL450489.1-201ENST00000612071 468 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF113AO15541 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF113AO15541 AL353743.1-202ENST00000431724 1695 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF113AO15541 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF113AO15541 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF113AO15541 AL035425.3-201ENST00000564206 4996 ntBASIC3.64□□□□□ -1.83
RNF113AO15541 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF113AO15541 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.63□□□□□ -1.83
RNF113AO15541 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF113AO15541 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF113AO15541 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF113AO15541 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms