Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC109464.2-201ENST00000510242 943 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 TMEM248P1-201ENST00000510579 951 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM38O00635 AC093840.1-201ENST00000511599 336 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 IGLVIV-53-201ENST00000520107 367 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM38O00635 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM38O00635 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM38O00635 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM38O00635 HMGB3P26-201ENST00000560051 582 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM38O00635 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM38O00635 MIR548S-201ENST00000581352 82 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM38O00635 VN1R90P-201ENST00000595717 726 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 LLPHP1-201ENST00000603571 367 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AL596327.1-201ENST00000603629 213 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AC025449.1-201ENST00000603896 529 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AL009028.1-201ENST00000604895 802 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AC004223.4-201ENST00000612426 332 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM38O00635 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 LINC00901.1-201ENST00000617252 152 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 AC231657.1-201ENST00000624313 397 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM38O00635 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM38O00635 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM38O00635 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM38O00635 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM38O00635 MTCO1P23-201ENST00000415223 1526 ntBASIC4.6□□□□□ -1.67
TRIM38O00635 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM38O00635 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM38O00635 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM38O00635 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM38O00635 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM38O00635 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM38O00635 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM38O00635 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM38O00635 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM38O00635 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM38O00635 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
TRIM38O00635 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM38O00635 OR52B1P-201ENST00000316506 909 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM38O00635 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
TRIM38O00635 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM38O00635 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM38O00635 RNU6-730P-201ENST00000383954 104 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 RNU6-356P-201ENST00000384140 107 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 RNU6-253P-201ENST00000384730 105 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 MIR153-1-201ENST00000384914 90 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM38O00635 RPS3AP24-201ENST00000407896 734 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 RN7SKP267-201ENST00000410381 285 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM38O00635 AL451139.1-201ENST00000434718 346 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 Z74696.2-201ENST00000436514 498 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM38O00635 MTCO1P14-201ENST00000441695 1559 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM38O00635 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM38O00635 PPIAP3-201ENST00000450588 505 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM38O00635 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM38O00635 USP9YP34-201ENST00000453983 808 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM38O00635 PABPC1P3-201ENST00000469174 459 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AC011276.1-201ENST00000469688 323 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 RPL23AP65-201ENST00000475608 468 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM38O00635 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM38O00635 AC108941.1-201ENST00000502853 530 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM38O00635 AC093767.1-201ENST00000504523 156 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 RN7SKP21-201ENST00000516503 220 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 RNU6-678P-201ENST00000516832 109 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AC104986.1-201ENST00000517978 436 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AC239860.2-201ENST00000525886 270 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.59□□□□□ -1.67
TRIM38O00635 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM38O00635 DYNLL1P4-201ENST00000549314 266 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.59□□□□□ -1.67
TRIM38O00635 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM38O00635 MIR3915-201ENST00000578518 97 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AC012417.1-201ENST00000582307 1039 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 MIR3611-201ENST00000584484 83 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AC020914.6-201ENST00000594327 272 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.59□□□□□ -1.67
TRIM38O00635 AC008782.1-201ENST00000603386 430 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 BNIP3P11-201ENST00000603878 563 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AP001330.5-201ENST00000607176 411 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM38O00635 AC122133.1-201ENST00000613964 233 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 AL607023.1-201ENST00000620045 248 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 MIR6715B-201ENST00000637172 77 ntBASIC4.59□□□□□ -1.67
TRIM38O00635 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM38O00635 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TRIM38O00635 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.59□□□□□ -1.68
TRIM38O00635 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms