Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MTHFD2P2-201ENST00000407725 247 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU6-584P-201ENST00000410350 95 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 RHEBP3-201ENST00000411920 351 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AL513175.1-201ENST00000431492 780 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC010881.1-201ENST00000433830 235 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 RPL7P59-201ENST00000447700 943 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 RBMY2UP-201ENST00000453474 324 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AL358832.1-201ENST00000497800 389 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 HSPD1P15-201ENST00000505573 1122 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC022790.1-201ENST00000522872 204 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 MTND2P26-201ENST00000528255 1029 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC092747.2-201ENST00000545069 983 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AL161713.1-201ENST00000555538 145 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 MIR5186-201ENST00000577504 120 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 MIR4509-3-201ENST00000578671 94 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 MIR4509-2-201ENST00000583920 94 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AP001542.2-201ENST00000593141 364 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AL160237.3-201ENST00000604114 1013 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 MIR4509-1-201ENST00000618224 94 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC006504.1-201ENST00000562493 3666 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 AC106754.1-201ENST00000562632 1513 ntBASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NEDD8-MDP1E9PL57 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU6-224P-201ENST00000384055 107 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 MIR217-201ENST00000384817 110 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 OR10R1P-201ENST00000441524 1141 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AL009048.1-201ENST00000450437 298 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 snoU13.7-201ENST00000459220 104 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC008155.2-201ENST00000464337 397 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC026784.1-201ENST00000507986 352 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC109471.1-201ENST00000511631 612 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 RNU6-488P-201ENST00000515918 99 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 RNA5SP309-201ENST00000516670 106 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 SNORA70.24-201ENST00000517233 118 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AP001372.4-201ENST00000524889 472 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC011611.1-201ENST00000552179 197 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 NCAPGP2-201ENST00000557911 754 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC083899.3-201ENST00000603413 594 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AL592148.2-201ENST00000612210 372 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC105227.2-201ENST00000615075 605 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC244205.2-202ENST00000635781 342 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AL732372.2-225ENST00000642124 456 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC000367.1-201ENST00000452711 1766 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 TNPO1P3-201ENST00000436471 2662 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC107081.3-201ENST00000612715 2034 ntBASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
NEDD8-MDP1E9PL57 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
NEDD8-MDP1E9PL57 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms