Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 HSFY1P1-201ENST00000423928 1178 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AC093151.1-201ENST00000427711 313 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 DPPA2P1-201ENST00000428060 556 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 HIGD1AP11-201ENST00000438361 280 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 RPS26P30-201ENST00000443431 335 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 UBDP1-202ENST00000457888 382 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AC091179.1-201ENST00000461606 579 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 RPL21P18-201ENST00000469899 480 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 RN7SKP21-201ENST00000516503 220 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AP000619.3-201ENST00000535634 1127 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 BNIP3P5-201ENST00000562290 498 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AC095057.3-201ENST00000567102 1157 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AC106734.1-201ENST00000568646 663 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AC120057.2-201ENST00000571520 271 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 MIR3160-1-201ENST00000577972 85 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 MAGOH2P-202ENST00000584384 429 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AC006116.7-201ENST00000590141 756 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AL355812.1-201ENST00000603215 216 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AC067959.1-201ENST00000604334 379 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 BNIP3P4-201ENST00000604946 565 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AL513477.2-201ENST00000607858 568 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AL451074.6-201ENST00000608512 729 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 MIR6867-201ENST00000610636 67 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 AL591516.1-201ENST00000611326 274 ntBASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RBFOX3A6NFN3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 RNA5SP283-201ENST00000365604 119 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 RNU6-761P-201ENST00000384148 107 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 SNORA3.3-201ENST00000408712 125 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 RNU6-77P-201ENST00000410554 91 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 RNU4-78P-201ENST00000410940 126 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 Z99755.1-201ENST00000414048 380 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC245054.2-201ENST00000415639 319 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AL356095.1-201ENST00000417217 199 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 OR4C10P-201ENST00000434991 931 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 CST9LP2-201ENST00000437612 320 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 Z99127.3-201ENST00000448158 395 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 HMGN3P1-201ENST00000453847 193 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC010460.1-201ENST00000507087 466 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC026402.1-201ENST00000513642 170 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC084824.1-201ENST00000550917 1005 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC040174.2-201ENST00000602701 465 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 DPRXP5-201ENST00000604662 539 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AL450270.1-201ENST00000606160 391 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AL110115.1-201ENST00000614396 364 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 MIR6875-201ENST00000617506 72 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC068831.8-201ENST00000620171 435 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 MIR6500-201ENST00000622700 86 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC084035.1-201ENST00000634543 607 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 MTND5P7-201ENST00000413558 1798 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 AC110774.1-201ENST00000623567 2018 ntBASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RBFOX3A6NFN3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
RBFOX3A6NFN3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.65□□□□□ -1.98
RBFOX3A6NFN3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms