Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SNORA48.5-201ENST00000391143 135 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC069282.1-201ENST00000411911 526 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC091390.3-201ENST00000426478 338 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 YWHAZP8-201ENST00000436935 731 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 CST9LP2-201ENST00000437612 320 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 OR51B8P-201ENST00000449892 769 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AL121877.1-201ENST00000453704 622 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 SNRPGP5-201ENST00000456003 220 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 RNU7-140P-201ENST00000459546 60 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AP001992.1-205ENST00000462248 379 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 RPL21P71-201ENST00000465598 459 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC093801.2-201ENST00000503966 1050 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC110792.2-201ENST00000510278 224 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 RNU6-416P-201ENST00000516265 103 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AP003102.1-201ENST00000525638 661 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 MTND5P21-201ENST00000531961 522 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AL442163.2-201ENST00000553912 710 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC007424.1-203ENST00000554613 687 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 TMF1P1-201ENST00000576058 373 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC090666.1-201ENST00000578241 445 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 MIR4425-201ENST00000580572 84 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC100793.4-201ENST00000613683 429 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AL109620.1-201ENST00000618738 1197 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AL356118.1-201ENST00000635272 1078 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 MTND4P8-201ENST00000514997 1362 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.45□□□□□ -1.86
SMIM28A0A1B0GU29 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 SNORA7.4-201ENST00000384249 137 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 PRRC2CP1-201ENST00000404428 159 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 HNRNPDP2-201ENST00000406475 478 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 RNU6-77P-201ENST00000410554 91 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 RNU6-55P-201ENST00000411092 107 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 RNU6-954P-201ENST00000411355 107 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 Z92545.1-201ENST00000411782 234 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 RPL30P2-201ENST00000414021 291 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 RPL31P45-201ENST00000419532 356 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC241520.1-201ENST00000422654 1099 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AL365396.1-201ENST00000430854 671 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC023347.2-201ENST00000433994 462 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 HMGB3P11-201ENST00000440127 604 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 RAB11AP1-201ENST00000442978 646 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 HMGB1P48-201ENST00000446155 598 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 SNORD108-201ENST00000459332 71 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 RPL37P6-202ENST00000464216 403 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 PRDX3P4-201ENST00000470828 747 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 HMGB1P38-201ENST00000490557 577 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC008885.2-201ENST00000509506 930 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC104108.1-201ENST00000509930 412 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 PRELID3BP4-201ENST00000515476 571 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 MTCO1P40-201ENST00000574371 625 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 MIR4325-201ENST00000583049 90 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 UBL5P2-201ENST00000583788 219 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AC008687.2-201ENST00000597865 520 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AP002906.1-201ENST00000603405 233 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AL160281.1-201ENST00000605307 311 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AL136370.1-201ENST00000608166 691 ntBASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.44□□□□□ -1.86
SMIM28A0A1B0GU29 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms