Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AL359837.1-201ENST00000381357 287 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 RN7SKP111-201ENST00000410349 271 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 FCF1P2-201ENST00000415284 583 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC073136.2-201ENST00000417282 849 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 BOLA3P4-201ENST00000418151 400 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 MRPS36P1-201ENST00000421291 307 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC008065.1-201ENST00000428525 348 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 RPL36P19-201ENST00000430744 301 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 ATP5JP1-201ENST00000431631 322 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AL357520.1-201ENST00000441557 453 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 CDC27P1-201ENST00000445384 715 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 Z73417.1-201ENST00000447373 778 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 PPIAP3-201ENST00000450588 505 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 FCF1P3-201ENST00000496394 590 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC026784.1-201ENST00000507986 352 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC093755.1-201ENST00000512950 1023 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AP001189.2-201ENST00000527320 189 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 MED28P5-201ENST00000528254 438 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 MTND2P26-201ENST00000528255 1029 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC103843.2-201ENST00000530523 682 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 MTND4P33-201ENST00000556706 766 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AADACP1-206ENST00000561502 1193 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 MTCYBP28-201ENST00000566728 1132 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC234772.3-201ENST00000602277 528 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC023158.2-201ENST00000614876 543 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 U4.6-201ENST00000621618 127 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AL161637.1-201ENST00000622380 412 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AP000770.2-201ENST00000623694 100 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC034229.5-201ENST00000624258 185 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC026634.1-201ENST00000634369 198 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 AL034408.1-202ENST00000636088 415 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 FAM157B-203ENST00000639350 358 ntBASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV5-4A0A0C4DH59 NMD3P1-201ENST00000439704 1488 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 RNU6-560P-201ENST00000364007 108 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 RNU1-85P-201ENST00000364127 164 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 MIR513B-201ENST00000385136 84 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 RPS3AP9-201ENST00000417027 792 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC068533.1-201ENST00000418542 415 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 HMGB1P49-201ENST00000418882 569 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 RPS15AP40-201ENST00000419621 391 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 PTENP1-201ENST00000447117 1215 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 RPL5P24-201ENST00000463742 885 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC087879.1-201ENST00000474343 374 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 MTCYBP16-201ENST00000509187 1129 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC018797.3-201ENST00000513388 1241 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 GTF2IP8-201ENST00000560687 584 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 BNIP3P26-201ENST00000600827 554 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC022022.2-201ENST00000602989 360 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC113194.1-201ENST00000606037 500 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 MIR7851-201ENST00000610611 160 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC013470.4-201ENST00000619978 986 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AP002782.1-201ENST00000623107 614 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AC000123.2-201ENST00000623124 461 ntBASIC3.47□□□□□ -1.85
TRBV5-4A0A0C4DH59 AL356121.2-201ENST00000624715 780 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms