Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 SAGE4P-201ENST00000442271 3381 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 RNU6-283P-201ENST00000364788 107 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 RNA5SP267-201ENST00000364893 126 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 Y_RNA.333-201ENST00000365274 102 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AL035405.1-201ENST00000400795 710 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 MTCO2P31-201ENST00000402702 684 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 MTND4P22-201ENST00000413116 1169 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC009237.5-201ENST00000414271 501 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 LIPT1P1-201ENST00000415870 1186 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AL158156.1-201ENST00000422509 473 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 OSTCP5-201ENST00000425293 453 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 HMGN3P1-201ENST00000453847 193 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AL136097.1-201ENST00000456945 913 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 RN7SL93P-201ENST00000463035 293 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 RPS4XP10-201ENST00000465034 731 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC084357.1-201ENST00000473404 255 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC087879.1-201ENST00000474343 374 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 HSPD1P15-201ENST00000505573 1122 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC112198.4-201ENST00000515450 351 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC104115.2-201ENST00000523026 687 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 NCAPGP2-201ENST00000557911 754 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC104072.1-201ENST00000568817 668 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC112503.1-201ENST00000608436 391 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 VN1R74P-201ENST00000613259 503 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC105227.2-201ENST00000615075 605 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC006065.5-201ENST00000623427 349 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 OR6C71P-202ENST00000641886 1107 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 ELL2P4-201ENST00000446870 1376 ntBASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.1□□□□□ -1.91
CLCF1Q9UBD9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 RNU5B-4P-201ENST00000363508 111 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 TMSB4XP8-201ENST00000402089 135 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC069218.2-201ENST00000411665 344 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC069282.1-201ENST00000411911 526 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 TMSB4XP6-201ENST00000415187 135 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 HSFY4P-201ENST00000415994 1181 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 KRR1P1-201ENST00000419430 803 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 TMSB4XP1-201ENST00000424567 135 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 RPL23AP33-201ENST00000442301 452 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 HMGN1P5-201ENST00000448591 263 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 MTCO3P20-201ENST00000454926 688 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 RPL21P10-201ENST00000463521 490 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 RN7SL601P-201ENST00000471221 293 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AP000563.1-201ENST00000490865 758 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC093663.1-201ENST00000497190 394 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC093801.2-201ENST00000503966 1050 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC026414.1-201ENST00000504046 698 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC118282.2-201ENST00000508739 374 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC093755.1-201ENST00000512950 1023 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC016065.2-201ENST00000514530 444 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 RNU2-27P-201ENST00000516185 142 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 RNA5SP309-201ENST00000516670 106 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 RNU4-60P-201ENST00000517239 135 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AP006245.1-201ENST00000522549 120 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AP003066.2-201ENST00000529375 555 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 OR8K4P-201ENST00000534608 872 ntBASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.09□□□□□ -1.91
CLCF1Q9UBD9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms