Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC048344.4-201ENST00000619744 527 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AP000484.1-201ENST00000620067 1252 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 MIR8059-201ENST00000620427 81 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 AL732372.2-225ENST00000642124 456 ntBASIC3.61□□□□□ -1.83
NDE1Q9NXR1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NDE1Q9NXR1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AL512646.1-201ENST00000269395 1077 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 RNU6-839P-201ENST00000363347 108 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 RNA5SP97-201ENST00000365006 84 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 MIR217-201ENST00000384817 110 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 RNA5SP424-201ENST00000390988 115 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 ENSAP1-201ENST00000392855 326 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 RPS4XP9-201ENST00000405151 780 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 HMGB3P20-201ENST00000417997 600 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 DPRXP1-201ENST00000426312 460 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 C4BPAP2-201ENST00000428434 478 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 CNOT7P1-201ENST00000429006 852 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 HMGB1P48-201ENST00000446155 598 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 FCF1P3-201ENST00000496394 590 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC111000.3-201ENST00000508057 576 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC119751.5-201ENST00000514077 770 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 MTCO1P30-201ENST00000515244 580 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 RNA5SP208-201ENST00000516156 78 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 HIGD1AP6-201ENST00000521833 279 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC023050.2-201ENST00000544968 387 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC137768.1-201ENST00000549998 553 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AL389895.1-201ENST00000554127 252 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC021171.1-201ENST00000603137 706 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC004908.3-201ENST00000610248 625 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC022509.4-201ENST00000621404 572 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC109315.1-201ENST00000584143 1347 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 Z99496.1-201ENST00000469424 1477 ntBASIC3.6□□□□□ -1.83
NDE1Q9NXR1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.6□□□□□ -1.83
NDE1Q9NXR1 AC022031.1-201ENST00000585985 2593 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 OTUD4P1-201ENST00000237841 3067 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC026951.1-201ENST00000559530 2459 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 RNU6-582P-201ENST00000362989 107 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 RNA5SP235-201ENST00000365411 114 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 SNORA51.12-201ENST00000384448 134 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 MIR192-201ENST00000384915 110 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 RPS16P5-201ENST00000406501 404 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC069218.2-201ENST00000411665 344 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC007390.1-201ENST00000415722 356 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AL590139.1-201ENST00000416267 400 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 Z97055.1-201ENST00000419730 712 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 COX6CP17-201ENST00000421389 185 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 RPL7P44-201ENST00000424827 742 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 Z93242.1-201ENST00000427102 353 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 RPL37P1-201ENST00000432310 284 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 YWHAZP8-201ENST00000436935 731 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 RN7SL303P-201ENST00000469773 251 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AL049830.2-201ENST00000480072 201 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC041039.1-201ENST00000485656 536 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.59□□□□□ -1.83
NDE1Q9NXR1 AC021146.8-201ENST00000507455 733 ntBASIC3.59□□□□□ -1.83
NDE1Q9NXR1 RAC1P2-201ENST00000511164 579 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms