Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AL672167.1-206ENST00000356293 943 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 RN7SKP95-201ENST00000362860 303 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 Y_RNA.169-201ENST00000363745 96 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 RNA5SP167-201ENST00000365461 116 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 RNU1-82P-201ENST00000390851 165 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 U3.30-201ENST00000391308 210 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AL031577.2-201ENST00000404133 280 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AL138878.1-201ENST00000405131 347 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 MIR1183-201ENST00000408856 89 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 RNU6-712P-201ENST00000410558 100 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 COX6B1P1-201ENST00000415962 213 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 CENPIP1-201ENST00000425713 902 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 RPL21P91-201ENST00000429231 479 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 RHOT1P3-201ENST00000436571 331 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 RPS24P6-201ENST00000452670 400 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC079168.2-201ENST00000453977 416 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 ARPC3P2-201ENST00000457786 533 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 snoU13.8-201ENST00000458890 104 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 RPS26P15-201ENST00000488067 348 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC093267.1-201ENST00000489176 961 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC023424.2-201ENST00000493479 777 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC008953.1-201ENST00000497334 318 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 HMGB1P22-201ENST00000505315 124 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC091868.1-201ENST00000508746 304 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC118465.1-201ENST00000513820 1271 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 MTND5P4-201ENST00000514978 288 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 MIR2114-201ENST00000516645 80 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 BGLT3-201ENST00000564523 994 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 RN7SL652P-201ENST00000577769 300 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 MIR7844-201ENST00000616161 122 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 CRYM-AS1-204ENST00000637983 556 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 AC125257.1-201ENST00000560400 2930 ntBASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB16Q9NRJ7 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AC004925.1-201ENST00000624256 2706 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AC108467.2-201ENST00000617640 1597 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AL445523.1-201ENST00000451184 1362 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 SNORA71.2-201ENST00000364941 134 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 MTCO3P12-201ENST00000416718 547 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 USP9YP26-201ENST00000421008 661 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 BRWD1P3-201ENST00000428816 390 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 RPS3AP54-201ENST00000435535 734 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 FABP3P2-201ENST00000453169 399 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 MTND1P9-201ENST00000453775 944 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 ISCUP1-201ENST00000454451 448 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AC091564.1-201ENST00000464563 479 ntBASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB16Q9NRJ7 AC021678.1-201ENST00000505195 936 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms