Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.51□□□□□ -1.69
USP29Q9HBJ7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
USP29Q9HBJ7 ZNF37BP-203ENST00000452306 1352 ntBASIC4.51□□□□□ -1.69
USP29Q9HBJ7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP29Q9HBJ7 SAGE2P-201ENST00000420011 2126 ntBASIC4.51□□□□□ -1.69
USP29Q9HBJ7 AC016588.2-201ENST00000632484 3021 ntBASIC4.51□□□□□ -1.69
USP29Q9HBJ7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 OR10J6P-201ENST00000289731 930 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 OR6C69P-201ENST00000394268 893 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 MIR1911-201ENST00000410783 80 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 RNA5SP104-201ENST00000410989 118 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC073264.1-201ENST00000411508 416 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 RPS20P14-201ENST00000412545 360 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 SNRPFP1-201ENST00000414761 252 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 RPS3AP44-201ENST00000425466 790 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 IPMKP1-201ENST00000425988 855 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 MTCO3P30-201ENST00000426425 670 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC023347.2-201ENST00000433994 462 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AL353748.1-201ENST00000440753 474 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 ABCF2P2-201ENST00000450549 296 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 MTND1P27-201ENST00000451117 902 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 RN7SL303P-201ENST00000469773 251 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC007537.2-201ENST00000472093 511 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AP000893.1-201ENST00000474462 794 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 RPS4XP15-201ENST00000489210 795 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 FTH1P24-201ENST00000503502 462 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC239860.2-201ENST00000525886 270 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC068831.4-201ENST00000556118 109 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AL021997.1-201ENST00000605757 193 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC023043.4-201ENST00000612081 449 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC010678.1-201ENST00000614118 713 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC131238.1-201ENST00000617135 328 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 RMST_9.1-201ENST00000619945 193 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AL590240.3-201ENST00000621416 943 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC019278.1-201ENST00000623516 479 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 CR383658.2-201ENST00000547576 1525 ntBASIC4.5□□□□□ -1.69
USP29Q9HBJ7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP29Q9HBJ7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 MAPK10-253ENST00000641010 4072 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 AL356473.1-201ENST00000406203 1408 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 OR4G11P-202ENST00000642116 1414 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 SNORA75-201ENST00000384158 137 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 RNU6-1119P-201ENST00000384349 108 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 RNU6-921P-201ENST00000384361 107 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 SNORD66.1-201ENST00000391230 76 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 RNU2-28P-201ENST00000410457 189 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 AL663109.1-201ENST00000411498 844 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.49□□□□□ -1.69
USP29Q9HBJ7 AC004552.1-201ENST00000419089 348 ntBASIC4.49□□□□□ -1.69
USP29Q9HBJ7 RPL17P36-201ENST00000420302 549 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms