Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 STMN1P1-201ENST00000617809 440 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 U6.48-201ENST00000618523 106 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC092628.2-201ENST00000622492 339 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AL353743.4-201ENST00000422653 1547 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC017071.1-201ENST00000564407 2204 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 RNU6-224P-201ENST00000384055 107 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 Y_RNA.578-201ENST00000390903 88 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 EI24P2-201ENST00000397776 1076 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 DNAJC19P6-201ENST00000401853 280 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AL356968.1-201ENST00000416622 474 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 RAC1P8-201ENST00000427086 527 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 RPL7P29-201ENST00000437151 728 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 MTCYBP31-201ENST00000438855 1122 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC008264.1-201ENST00000447612 367 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC125238.1-201ENST00000448842 249 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC096992.1-201ENST00000459808 709 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC023050.1-201ENST00000498198 304 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 IGKV2-23-201ENST00000518729 323 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC093331.1-201ENST00000521474 169 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 MTND4P33-201ENST00000556706 766 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC095057.3-201ENST00000567102 1157 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 PCNAP1-202ENST00000595299 752 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 VN1R78P-201ENST00000597393 564 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC103710.3-201ENST00000608157 948 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC092653.1-201ENST00000608509 531 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC083809.1-201ENST00000615051 472 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC013470.4-201ENST00000619978 986 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AL354798.1-201ENST00000622505 329 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 AC112200.1-201ENST00000625015 234 ntBASIC4.24□□□□□ -1.73
UPF2Q9HAU5 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UPF2Q9HAU5 MTND4P31-201ENST00000425607 1343 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 RPL7P60-201ENST00000397636 735 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AL049693.1-201ENST00000402760 611 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 RAB28P1-201ENST00000411517 641 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 ELOCP9-201ENST00000418624 239 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC084290.1-201ENST00000434995 374 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 RPL21P89-201ENST00000444021 467 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 TPT1P12-201ENST00000448968 492 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 RPL7P31-201ENST00000450192 724 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC097262.1-201ENST00000452559 548 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC007967.1-201ENST00000455422 1159 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC005410.1-202ENST00000460347 485 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 RN7SL330P-201ENST00000469709 307 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AL049830.2-201ENST00000480072 201 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 RPL5P23-201ENST00000496040 868 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC091951.3-201ENST00000504093 246 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC008565.1-201ENST00000509046 885 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 MTCO3P15-201ENST00000526563 574 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 LRRC6P1-201ENST00000532188 885 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 POLR2KP1-201ENST00000553226 168 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AGGF1P6-201ENST00000569213 976 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 MTND3P13-201ENST00000574391 343 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AL353778.1-201ENST00000603149 408 ntBASIC4.23□□□□□ -1.73
UPF2Q9HAU5 AC025588.2-201ENST00000604851 466 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms