Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 SNORA19.2-201ENST00000516013 114 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 HAUS8P1-201ENST00000549005 542 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 SCOCP1-201ENST00000554676 349 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 MIR1269B-201ENST00000580405 75 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AL354950.2-201ENST00000617939 290 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 AC020633.1-201ENST00000468439 2247 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 ZNF652P1-201ENST00000442420 1309 ntBASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A2Q9H9S3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC092162.3-201ENST00000624511 1624 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 RNU6-169P-201ENST00000365336 107 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 ARF4P3-201ENST00000397387 509 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 MIR1178-201ENST00000408396 91 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 ELOCP4-201ENST00000420090 333 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 MTCO3P46-201ENST00000425787 232 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC104837.2-201ENST00000427236 424 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 RPL37P1-201ENST00000432310 284 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 RPL36AP15-201ENST00000444514 266 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC090804.1-201ENST00000448870 490 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 PRPF38AP1-201ENST00000451976 933 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AL645937.3-201ENST00000453647 936 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 HMGN3P1-201ENST00000453847 193 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC008953.1-201ENST00000497334 318 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC024558.1-201ENST00000505008 528 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 GAPDHP56-201ENST00000506031 988 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 PDCD5P1-201ENST00000543528 309 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 MTCYBP13-201ENST00000578634 1093 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 RPL26P30-202ENST00000602923 645 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AL133215.3-201ENST00000609801 448 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC093838.1-201ENST00000613014 469 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC068831.8-201ENST00000620171 435 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 CYP4F35P-202ENST00000636121 390 ntBASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A2Q9H9S3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 RNA5SP183-201ENST00000362452 119 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 RNU4-1-201ENST00000363925 141 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 RNA5SP223-201ENST00000365174 120 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 RNU6-921P-201ENST00000384361 107 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 MIR1-2-201ENST00000384961 85 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 PRRC2CP1-201ENST00000404428 159 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms