Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 OR6C69P-201ENST00000394268 893 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 HSPE1P26-201ENST00000405341 275 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 RNU6-272P-201ENST00000411028 104 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AL356095.1-201ENST00000417217 199 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 MTCO1P3-201ENST00000429327 192 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 GTF2IP7-202ENST00000436677 309 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 HMGN2P21-201ENST00000447764 270 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 RPS3AP46-201ENST00000448352 682 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC005410.1-202ENST00000460347 485 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC084357.1-201ENST00000473404 255 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 RPS4XP15-201ENST00000489210 795 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 HIGD1AP6-201ENST00000521833 279 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AP001317.1-201ENST00000531194 960 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 OR4H12P-201ENST00000556269 907 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 MIR3912-201ENST00000577566 105 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC015688.2-201ENST00000584523 262 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC015726.1-201ENST00000602353 681 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC091488.1-201ENST00000604239 660 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 ARF4P1-201ENST00000605447 541 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC087683.2-201ENST00000611384 326 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC022149.2-201ENST00000621061 203 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC011330.2-201ENST00000621680 635 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC110801.1-201ENST00000623590 212 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 AP000553.6-201ENST00000641242 118 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 RLIMP1-201ENST00000339626 1680 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 DBF4P1-201ENST00000412976 1892 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 SNORA58B-201ENST00000364259 136 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 snoZ40.1-201ENST00000364540 72 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 ERHP2-201ENST00000402323 299 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 SFR1P1-201ENST00000403720 688 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 U3.39-201ENST00000408569 239 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC093578.1-201ENST00000415219 368 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 KRR1P1-201ENST00000419430 803 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AP000907.1-201ENST00000428428 510 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 MTATP6P17-201ENST00000431030 672 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 CYCSP43-201ENST00000438233 310 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AL591719.1-201ENST00000444669 744 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC007327.1-201ENST00000447461 264 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 NUTF2P3-201ENST00000448540 384 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AL139824.2-201ENST00000458731 1095 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 VPS26AP1-201ENST00000483197 979 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC231760.1-201ENST00000498002 260 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC092593.2-201ENST00000513866 913 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 RNU2-27P-201ENST00000516185 142 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 RNU2-58P-201ENST00000516403 183 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 IGHV3-76-201ENST00000522465 295 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 MTCO2P15-201ENST00000532655 656 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC023161.2-201ENST00000551218 780 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC004217.3-201ENST00000551552 878 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AP001269.3-201ENST00000588718 329 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC025588.2-201ENST00000604851 466 ntBASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC28BQ9BUN5 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms