Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RPL23AP16-201ENST00000441715 421 ntBASIC4.66□□□□□ -1.66
SMOQ99835 MTND1P1-201ENST00000445453 368 ntBASIC4.66□□□□□ -1.66
SMOQ99835 PHBP16-201ENST00000446318 950 ntBASIC4.66□□□□□ -1.66
SMOQ99835 MTND4P18-201ENST00000447010 465 ntBASIC4.66□□□□□ -1.66
SMOQ99835 USP9YP12-201ENST00000450481 570 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AL033528.1-201ENST00000453780 140 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC026410.2-201ENST00000460281 156 ntBASIC4.66□□□□□ -1.66
SMOQ99835 MTND6P6-201ENST00000478031 263 ntBASIC4.66□□□□□ -1.66
SMOQ99835 TMED11P-201ENST00000479478 690 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC026979.1-201ENST00000492525 396 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AL358832.1-201ENST00000497800 389 ntBASIC4.66□□□□□ -1.66
SMOQ99835 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SMOQ99835 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.66□□□□□ -1.66
SMOQ99835 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SMOQ99835 RN7SKP46-201ENST00000515942 234 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.66□□□□□ -1.66
SMOQ99835 MED28P5-201ENST00000528254 438 ntBASIC4.66□□□□□ -1.66
SMOQ99835 MTCYBP41-201ENST00000528913 1123 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.66□□□□□ -1.66
SMOQ99835 AC008127.2-201ENST00000549925 1075 ntBASIC4.66□□□□□ -1.66
SMOQ99835 HSPE1P3-201ENST00000559254 309 ntBASIC4.66□□□□□ -1.66
SMOQ99835 TPRKBP2-201ENST00000565969 475 ntBASIC4.66□□□□□ -1.66
SMOQ99835 MIR3913-1-201ENST00000577744 102 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AP001180.3-201ENST00000582221 145 ntBASIC4.66□□□□□ -1.66
SMOQ99835 MIR4307-201ENST00000582802 84 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.66□□□□□ -1.66
SMOQ99835 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.66□□□□□ -1.66
SMOQ99835 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.66□□□□□ -1.66
SMOQ99835 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.66□□□□□ -1.66
SMOQ99835 AC079587.1-201ENST00000603846 277 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AL160290.3-201ENST00000604869 165 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC010201.1-201ENST00000605051 540 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC131902.3-201ENST00000611767 581 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC083809.1-201ENST00000615051 472 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC123768.4-201ENST00000616244 701 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC005086.4-201ENST00000623065 213 ntBASIC4.66□□□□□ -1.66
SMOQ99835 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.66□□□□□ -1.66
SMOQ99835 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.66□□□□□ -1.66
SMOQ99835 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMOQ99835 AC006378.2-201ENST00000623178 2476 ntBASIC4.66□□□□□ -1.66
SMOQ99835 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMOQ99835 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SMOQ99835 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMOQ99835 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMOQ99835 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.65□□□□□ -1.66
SMOQ99835 AP000756.2-201ENST00000624168 2567 ntBASIC4.65□□□□□ -1.66
SMOQ99835 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SMOQ99835 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
SMOQ99835 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SMOQ99835 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SMOQ99835 RNU6-1283P-201ENST00000365314 105 ntBASIC4.65□□□□□ -1.67
SMOQ99835 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SMOQ99835 RNU6-809P-201ENST00000384461 107 ntBASIC4.65□□□□□ -1.67
SMOQ99835 Y_RNA.582-201ENST00000391023 95 ntBASIC4.65□□□□□ -1.67
SMOQ99835 RNU6-952P-201ENST00000391164 108 ntBASIC4.65□□□□□ -1.67
SMOQ99835 MIR320C1-201ENST00000408566 88 ntBASIC4.65□□□□□ -1.67
SMOQ99835 Y_RNA.598-201ENST00000410480 95 ntBASIC4.65□□□□□ -1.67
SMOQ99835 RPS20P14-201ENST00000412545 360 ntBASIC4.65□□□□□ -1.67
SMOQ99835 MTND1P21-201ENST00000412991 285 ntBASIC4.65□□□□□ -1.67
SMOQ99835 HMGB3P23-201ENST00000414981 585 ntBASIC4.65□□□□□ -1.67
SMOQ99835 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.65□□□□□ -1.67
SMOQ99835 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.65□□□□□ -1.67
SMOQ99835 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.65□□□□□ -1.67
SMOQ99835 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.65□□□□□ -1.67
SMOQ99835 AL445669.1-201ENST00000426743 755 ntBASIC4.65□□□□□ -1.67
SMOQ99835 C4BPAP2-201ENST00000428434 478 ntBASIC4.65□□□□□ -1.67
SMOQ99835 NPM1P34-201ENST00000428821 893 ntBASIC4.65□□□□□ -1.67
SMOQ99835 MRPS10P2-201ENST00000431226 381 ntBASIC4.65□□□□□ -1.67
SMOQ99835 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.65□□□□□ -1.67
SMOQ99835 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.65□□□□□ -1.67
SMOQ99835 SNRPEP7-201ENST00000438350 220 ntBASIC4.65□□□□□ -1.67
SMOQ99835 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SMOQ99835 AC114495.1-201ENST00000441274 436 ntBASIC4.65□□□□□ -1.67
SMOQ99835 MTND5P14-201ENST00000441481 1267 ntBASIC4.65□□□□□ -1.67
SMOQ99835 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SMOQ99835 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.65□□□□□ -1.67
SMOQ99835 EEF1A1P1-201ENST00000447052 739 ntBASIC4.65□□□□□ -1.67
SMOQ99835 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.65□□□□□ -1.67
SMOQ99835 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.65□□□□□ -1.67
SMOQ99835 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.65□□□□□ -1.67
SMOQ99835 SNRPFP4-201ENST00000456366 242 ntBASIC4.65□□□□□ -1.67
SMOQ99835 BTF3P5-201ENST00000457252 467 ntBASIC4.65□□□□□ -1.67
SMOQ99835 RPL7P22-201ENST00000466005 733 ntBASIC4.65□□□□□ -1.67
SMOQ99835 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SMOQ99835 LARP1BP2-201ENST00000486594 519 ntBASIC4.65□□□□□ -1.67
SMOQ99835 AC023424.2-201ENST00000493479 777 ntBASIC4.65□□□□□ -1.67
SMOQ99835 FTH1P24-201ENST00000503502 462 ntBASIC4.65□□□□□ -1.67
SMOQ99835 AC093840.1-201ENST00000511599 336 ntBASIC4.65□□□□□ -1.67
SMOQ99835 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.65□□□□□ -1.67
SMOQ99835 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.65□□□□□ -1.67
SMOQ99835 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.65□□□□□ -1.67
SMOQ99835 TRAV8-5-201ENST00000537369 341 ntBASIC4.65□□□□□ -1.67
SMOQ99835 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SMOQ99835 AL133241.1-201ENST00000556832 487 ntBASIC4.65□□□□□ -1.67
SMOQ99835 AC084757.1-201ENST00000559987 490 ntBASIC4.65□□□□□ -1.67
SMOQ99835 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.65□□□□□ -1.67
SMOQ99835 AC110743.1-201ENST00000584870 478 ntBASIC4.65□□□□□ -1.67
SMOQ99835 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.65□□□□□ -1.67
SMOQ99835 NF1P5-201ENST00000588287 448 ntBASIC4.65□□□□□ -1.67
SMOQ99835 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms