Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.56□□□□□ -1.84
ABCA3Q99758 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.56□□□□□ -1.84
ABCA3Q99758 UQCRHP3-201ENST00000451503 251 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ABCA3Q99758 TRAV37-201ENST00000553906 342 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 MIR4635-201ENST00000583759 79 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ABCA3Q99758 BNIP3P8-201ENST00000597863 560 ntBASIC3.56□□□□□ -1.84
ABCA3Q99758 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ABCA3Q99758 AC093311.1-201ENST00000506586 2021 ntBASIC3.55□□□□□ -1.84
ABCA3Q99758 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ABCA3Q99758 LINC01355-201ENST00000566551 5444 ntBASIC3.55□□□□□ -1.84
ABCA3Q99758 MIR3074-201ENST00000384885 81 ntBASIC3.55□□□□□ -1.84
ABCA3Q99758 AL590290.1-201ENST00000405336 380 ntBASIC3.55□□□□□ -1.84
ABCA3Q99758 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.55□□□□□ -1.84
ABCA3Q99758 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.55□□□□□ -1.84
ABCA3Q99758 MTCO1P39-201ENST00000426148 480 ntBASIC3.55□□□□□ -1.84
ABCA3Q99758 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.55□□□□□ -1.84
ABCA3Q99758 AP000867.2-201ENST00000532468 320 ntBASIC3.55□□□□□ -1.84
ABCA3Q99758 AL391156.1-201ENST00000554965 554 ntBASIC3.55□□□□□ -1.84
ABCA3Q99758 AC092608.2-201ENST00000624427 218 ntBASIC3.55□□□□□ -1.84
ABCA3Q99758 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ABCA3Q99758 AC004925.1-201ENST00000624256 2706 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
ABCA3Q99758 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ABCA3Q99758 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
ABCA3Q99758 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.54□□□□□ -1.84
ABCA3Q99758 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
ABCA3Q99758 SNORA36C-201ENST00000384289 132 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 RPS12P23-201ENST00000419579 400 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 TRGV5P-201ENST00000419915 354 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AL356320.1-201ENST00000429616 163 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AL591806.2-201ENST00000433122 173 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.54□□□□□ -1.84
ABCA3Q99758 AL590103.1-201ENST00000434488 307 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AP000936.3-201ENST00000438127 255 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AC092013.1-201ENST00000438795 332 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.54□□□□□ -1.84
ABCA3Q99758 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.54□□□□□ -1.84
ABCA3Q99758 OR6K1P-201ENST00000456766 971 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 RNA5SP458-201ENST00000516188 119 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.54□□□□□ -1.84
ABCA3Q99758 FAM60DP-201ENST00000524174 632 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.54□□□□□ -1.84
ABCA3Q99758 MIR4648-201ENST00000580107 72 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AC103810.6-201ENST00000606708 136 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AC103798.2-201ENST00000624292 632 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AC009039.2-201ENST00000624524 529 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 AC006020.1-201ENST00000420179 1854 ntBASIC3.54□□□□□ -1.84
ABCA3Q99758 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.54□□□□□ -1.84
ABCA3Q99758 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
ABCA3Q99758 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ABCA3Q99758 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ABCA3Q99758 U3.6-201ENST00000363622 211 ntBASIC3.53□□□□□ -1.84
ABCA3Q99758 Y_RNA.226-201ENST00000364337 114 ntBASIC3.53□□□□□ -1.84
ABCA3Q99758 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.53□□□□□ -1.84
ABCA3Q99758 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.53□□□□□ -1.84
ABCA3Q99758 HMGB3P12-201ENST00000438745 556 ntBASIC3.53□□□□□ -1.84
ABCA3Q99758 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ABCA3Q99758 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.53□□□□□ -1.84
ABCA3Q99758 AL139286.1-201ENST00000604465 483 ntBASIC3.53□□□□□ -1.84
ABCA3Q99758 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.53□□□□□ -1.84
ABCA3Q99758 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ABCA3Q99758 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ABCA3Q99758 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
ABCA3Q99758 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ABCA3Q99758 AC095050.2-201ENST00000510748 1458 ntBASIC3.53□□□□□ -1.84
ABCA3Q99758 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.53□□□□□ -1.85
ABCA3Q99758 RNU4-26P-201ENST00000410270 107 ntBASIC3.53□□□□□ -1.85
ABCA3Q99758 AL031736.2-201ENST00000426573 787 ntBASIC3.53□□□□□ -1.85
ABCA3Q99758 RPL23AP22-201ENST00000437556 453 ntBASIC3.53□□□□□ -1.85
ABCA3Q99758 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.53□□□□□ -1.85
ABCA3Q99758 OR5H5P-201ENST00000503164 928 ntBASIC3.53□□□□□ -1.85
ABCA3Q99758 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
ABCA3Q99758 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.53□□□□□ -1.85
ABCA3Q99758 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
ABCA3Q99758 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.85
ABCA3Q99758 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.53□□□□□ -1.85
ABCA3Q99758 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
ABCA3Q99758 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.53□□□□□ -1.85
ABCA3Q99758 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.53□□□□□ -1.85
ABCA3Q99758 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.52□□□□□ -1.85
ABCA3Q99758 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
ABCA3Q99758 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ABCA3Q99758 AC092593.1-201ENST00000515413 1815 ntBASIC3.52□□□□□ -1.85
ABCA3Q99758 SKINT1L-201ENST00000401057 817 ntBASIC3.52□□□□□ -1.85
ABCA3Q99758 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ABCA3Q99758 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ABCA3Q99758 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.52□□□□□ -1.85
ABCA3Q99758 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.52□□□□□ -1.85
ABCA3Q99758 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.52□□□□□ -1.85
ABCA3Q99758 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.52□□□□□ -1.85
ABCA3Q99758 AC044913.1-201ENST00000557200 430 ntBASIC3.52□□□□□ -1.85
ABCA3Q99758 MIR4644-201ENST00000579929 84 ntBASIC3.52□□□□□ -1.85
ABCA3Q99758 AL365503.1-201ENST00000605247 905 ntBASIC3.52□□□□□ -1.85
ABCA3Q99758 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
ABCA3Q99758 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ABCA3Q99758 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ABCA3Q99758 AP000526.1-201ENST00000603308 1388 ntBASIC3.52□□□□□ -1.85
ABCA3Q99758 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms