Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 SRP72P2-201ENST00000344851 1979 ntBASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.17□□□□□ -1.9
COL21A1Q96P44 AC017071.1-201ENST00000564407 2204 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL21A1Q96P44 PABPC1P7-201ENST00000413177 1513 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 AL592494.2-201ENST00000425455 1548 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 RNA5SP119-201ENST00000362715 117 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 U3.11-201ENST00000364476 212 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 RNA5SP189-201ENST00000364920 115 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 AC241520.1-201ENST00000422654 1099 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 AL513175.1-201ENST00000431492 780 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 AL691517.1-201ENST00000440833 1235 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 RN7SL293P-201ENST00000481765 281 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 AC078918.1-201ENST00000498515 228 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 AC108078.3-201ENST00000502633 489 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 FCF1P8-201ENST00000510322 597 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 RNU6-488P-201ENST00000515918 99 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 DUXAP2-201ENST00000519198 589 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 RN7SL339P-201ENST00000580597 296 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL21A1Q96P44 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 SNORA50A-202ENST00000629536 136 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL21A1Q96P44 SEPT7P7-201ENST00000420492 1301 ntBASIC3.16□□□□□ -1.9
COL21A1Q96P44 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL21A1Q96P44 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
COL21A1Q96P44 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL21A1Q96P44 AC107081.3-201ENST00000612715 2034 ntBASIC3.15□□□□□ -1.9
COL21A1Q96P44 AL133383.2-201ENST00000622958 2336 ntBASIC3.15□□□□□ -1.9
COL21A1Q96P44 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
COL21A1Q96P44 AC004972.1-201ENST00000623934 2209 ntBASIC3.15□□□□□ -1.9
COL21A1Q96P44 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 MIR148B-201ENST00000362252 99 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 SNORA31-201ENST00000362607 130 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 RNA5SP197-201ENST00000363357 119 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 MIR7-3-201ENST00000384898 110 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 RPS7P15-201ENST00000415804 584 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 OR51AB1P-201ENST00000429046 620 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 CKS1BP5-201ENST00000434172 273 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 UBE2V1P5-201ENST00000440070 405 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 RPL6P5-201ENST00000445678 828 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 BX248409.1-201ENST00000455497 255 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 SNORA59A-201ENST00000459326 152 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 SNRPGP3-201ENST00000469405 227 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC133963.2-201ENST00000513686 578 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC095057.3-201ENST00000567102 1157 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC106734.1-201ENST00000568646 663 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 MIR5186-201ENST00000577504 120 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC007687.1-201ENST00000602704 304 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC007566.2-201ENST00000603642 413 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC019176.2-201ENST00000611579 315 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC003001.2-201ENST00000616294 831 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 AL355365.1-201ENST00000616480 294 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 AC073569.3-201ENST00000619055 682 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL21A1Q96P44 AL049781.1-201ENST00000623195 3585 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 MTND5P27-201ENST00000428871 1720 ntBASIC3.15□□□□□ -1.91
COL21A1Q96P44 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COL21A1Q96P44 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL21A1Q96P44 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL21A1Q96P44 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL21A1Q96P44 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.14□□□□□ -1.91
COL21A1Q96P44 SNORA9-201ENST00000384215 133 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms