Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CLCA3P-203ENST00000490028 2781 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 RNU6-858P-201ENST00000362436 107 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 SNORA64.1-201ENST00000362600 132 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 Y_RNA.48-201ENST00000362710 103 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 RNA5SP507-201ENST00000363603 121 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 Y_RNA.304-201ENST00000365011 112 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 RNU6-1154P-201ENST00000391001 104 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 RPL23AP27-201ENST00000415161 451 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 SYF2P2-201ENST00000417620 583 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 DUTP4-201ENST00000424782 475 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC093106.2-201ENST00000428212 385 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC091286.1-201ENST00000431233 461 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC091021.1-201ENST00000468051 388 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 AL049830.2-201ENST00000480072 201 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC092436.3-201ENST00000511788 257 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 RNU6-62P-201ENST00000516526 102 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 IGHV4-55-201ENST00000520889 368 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 FXNP1-201ENST00000555153 337 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC005341.1-201ENST00000571086 708 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 AC093227.2-201ENST00000589357 285 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 RPL23AP92-201ENST00000603609 255 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 DLEU2_2.2-201ENST00000615474 90 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 Z97989.1-201ENST00000531702 2421 ntBASIC6.78□□□□□ -1.32
LRCH3Q96II8 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
LRCH3Q96II8 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
LRCH3Q96II8 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
LRCH3Q96II8 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
LRCH3Q96II8 AC245100.2-201ENST00000454544 1679 ntBASIC6.77□□□□□ -1.32
LRCH3Q96II8 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
LRCH3Q96II8 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LRCH3Q96II8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
LRCH3Q96II8 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LRCH3Q96II8 MIR625-201ENST00000385047 85 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 AC245096.1-201ENST00000413104 546 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 AL445305.1-201ENST00000432577 575 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 RPS12P17-201ENST00000438591 377 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 RPL23AP60-201ENST00000450011 454 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 AC109925.1-201ENST00000478069 331 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 SERF1AP1-201ENST00000514575 187 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 RPL10P14-201ENST00000565265 298 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 AL359547.2-201ENST00000615810 418 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 AC100827.5-201ENST00000615883 426 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
LRCH3Q96II8 RBMY1HP-201ENST00000382759 1389 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
LRCH3Q96II8 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
LRCH3Q96II8 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
LRCH3Q96II8 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.77□□□□□ -1.33
LRCH3Q96II8 PABPC1P8-201ENST00000452851 2086 ntBASIC6.77□□□□□ -1.33
LRCH3Q96II8 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 AC011592.1-201ENST00000624647 3634 ntBASIC6.76□□□□□ -1.33
LRCH3Q96II8 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
LRCH3Q96II8 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LRCH3Q96II8 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms