Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SNORA56-201ENST00000383966 129 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 BTBD10P2-201ENST00000404779 676 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 RNU2-21P-201ENST00000410368 188 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 Y_RNA.608-201ENST00000410647 95 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 MTATP6P27-201ENST00000416987 621 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 RPS15AP40-201ENST00000419621 391 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC012065.2-201ENST00000421295 375 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC245028.1-201ENST00000423259 256 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 MTND3P21-201ENST00000433774 331 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 RPS20P1-201ENST00000434853 354 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 NANOGNBP1-201ENST00000448444 480 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 Z82190.1-201ENST00000454534 490 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AP001025.2-201ENST00000490908 477 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC008897.1-201ENST00000494006 347 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC034222.1-201ENST00000494052 532 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC105252.1-201ENST00000503089 286 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 RNA5SP446-201ENST00000515955 82 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC006960.3-201ENST00000561845 705 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC053481.3-201ENST00000577881 843 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC009977.1-201ENST00000586015 570 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 HMGB2P1-201ENST00000591146 634 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 BCRP9-201ENST00000605312 388 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AL109618.2-201ENST00000605527 211 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AC091965.4-201ENST00000607691 587 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 FAM157B-203ENST00000639350 358 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 MAPK10-286ENST00000641208 8747 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 AL450326.2-201ENST00000421913 1962 ntBASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.29□□□□□ -1.72
CTHRC1Q96CG8 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC097714.1-201ENST00000511272 1647 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 RNU6-28P-201ENST00000362378 107 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 RNU1-130P-201ENST00000363930 160 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 RNU6-398P-201ENST00000384143 109 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 OR8F1P-201ENST00000425243 930 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC007742.1-201ENST00000425789 329 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AL445669.1-201ENST00000426743 755 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 BX890604.2-201ENST00000427883 474 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 RPL21P91-201ENST00000429231 479 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 ELOCP26-201ENST00000436067 329 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC093392.2-201ENST00000450682 337 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC098824.1-201ENST00000453565 980 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 BTF3P5-201ENST00000457252 467 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 RPS20P21-201ENST00000466859 343 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 RPS3AP17-201ENST00000472594 777 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 RPL12P20-201ENST00000475538 479 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 RN7SKP82-201ENST00000516786 223 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 SNORA18.6-201ENST00000516792 115 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 RNU6-1003P-201ENST00000517099 105 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC092470.1-201ENST00000546187 132 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 EEF1B2P4-201ENST00000551398 348 ntBASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.28□□□□□ -1.72
CTHRC1Q96CG8 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms