Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.52□□□□□ -1.69
ATP2A3Q93084 AP000811.1-201ENST00000603803 651 ntBASIC4.52□□□□□ -1.69
ATP2A3Q93084 AL160290.3-201ENST00000604869 165 ntBASIC4.52□□□□□ -1.69
ATP2A3Q93084 AC010201.1-201ENST00000605051 540 ntBASIC4.52□□□□□ -1.69
ATP2A3Q93084 AL591034.3-201ENST00000605511 685 ntBASIC4.52□□□□□ -1.69
ATP2A3Q93084 AC004492.1-201ENST00000607036 742 ntBASIC4.52□□□□□ -1.69
ATP2A3Q93084 AC245297.2-201ENST00000610119 565 ntBASIC4.52□□□□□ -1.69
ATP2A3Q93084 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATP2A3Q93084 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.52□□□□□ -1.69
ATP2A3Q93084 MIR8059-201ENST00000620427 81 ntBASIC4.52□□□□□ -1.69
ATP2A3Q93084 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.52□□□□□ -1.69
ATP2A3Q93084 FP325313.1-201ENST00000638228 703 ntBASIC4.52□□□□□ -1.69
ATP2A3Q93084 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.52□□□□□ -1.69
ATP2A3Q93084 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
ATP2A3Q93084 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATP2A3Q93084 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATP2A3Q93084 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ATP2A3Q93084 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 RNU1-15P-201ENST00000353977 144 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 RNA5SP388-201ENST00000362584 119 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 Y_RNA.201-201ENST00000364052 96 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 RNU1-85P-201ENST00000364127 164 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 RNU4-75P-201ENST00000364621 146 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 Y_RNA.560-201ENST00000384689 102 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AL021407.1-201ENST00000404531 386 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 MTCO3P31-201ENST00000405526 789 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 VN1R8P-201ENST00000407739 893 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 RNA5SP317-201ENST00000410176 116 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 RNA5SP311-201ENST00000411290 116 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 RPS15AP38-201ENST00000413110 372 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC092832.1-201ENST00000422934 400 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC019178.2-201ENST00000423595 505 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 HSFY6P-201ENST00000445573 403 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 RPL29P29-201ENST00000448725 423 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC009961.3-201ENST00000449832 765 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 DDX39BP2-208ENST00000453923 258 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 FGF7P3-201ENST00000454645 303 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 MTND4LP3-201ENST00000468320 276 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 NCOR1P1-202ENST00000486162 291 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC092045.1-201ENST00000495716 1231 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC104685.1-201ENST00000502445 371 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC008958.1-201ENST00000511047 682 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC006499.6-201ENST00000511169 607 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC010625.1-201ENST00000511296 403 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC018797.3-201ENST00000513388 1241 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 RNA5SP315-201ENST00000516340 116 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 RNA5SP312-201ENST00000517068 116 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 MYL12AP1-201ENST00000518490 515 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC007954.1-201ENST00000554198 494 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 TRAV15-201ENST00000556680 249 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 TVP23BP1-201ENST00000557500 617 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AL009028.1-201ENST00000604895 802 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC091946.2-201ENST00000606105 291 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC007494.3-201ENST00000624660 743 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.51□□□□□ -1.69
ATP2A3Q93084 LARP1BP1-201ENST00000506036 1359 ntBASIC4.51□□□□□ -1.69
ATP2A3Q93084 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATP2A3Q93084 AC011978.2-201ENST00000569835 2054 ntBASIC4.5□□□□□ -1.69
ATP2A3Q93084 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.5□□□□□ -1.69
ATP2A3Q93084 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 293.1 ms